RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 RPP21Q9H633 154 aaKnown RBP12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 NRN1Q9NPD7 142 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 DPM3Q9P2X0 92 aa12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 TBL2Q9Y4P3 447 aaKnown RBP12.32□□□□□ -0.44
TNFSF13-202ENST00000349228 M0R1W7 72 aa12.31□□□□□ -0.44
TNFSF13-202ENST00000349228 CA1P00915 261 aaPredicted RBP12.31□□□□□ -0.44
TNFSF13-202ENST00000349228 PSG1P11464 419 aa12.31□□□□□ -0.44
TNFSF13-202ENST00000349228 RUSC1-AS1Q66K80 236 aa12.31□□□□□ -0.44
TNFSF13-202ENST00000349228 OR4B1Q8NGF8 309 aa12.31□□□□□ -0.44
TNFSF13-202ENST00000349228 MIEN1Q9BRT3 115 aa12.31□□□□□ -0.44
TNFSF13-202ENST00000349228 WNT10AQ9GZT5 417 aa12.31□□□□□ -0.44
TNFSF13-202ENST00000349228 ZGRF1Q86YA3 2104 aa12.31□□□□□ -0.44
TNFSF13-202ENST00000349228 HIGD1CA8MV81 97 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 CNIH1O95406 144 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 PRR27Q6MZM9 219 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 NPBQ8NG41 125 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 SLC25A39Q9BZJ4 359 aaPredicted RBP12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 ONECUT1Q9UBC0 465 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 A0A1B0GXF2 115 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 C19orf71A6NCJ1 209 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 FAM90A27PA6NNH2 459 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 SNRPCP09234 159 aaKnown RBP12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 LYZP61626 148 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 MMDQ15546 238 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 LYPD1Q8N2G4 141 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 C18orf32Q8TCD1 76 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 VN1R17PQ8TDU5 208 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 NEU4Q8WWR8 484 aaPredicted RBP12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 DAZAP1Q96EP5 407 aaKnown RBP12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 FBXL7Q9UJT9 491 aa12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 RP1L1Q8IWN7 2480 aaPredicted RBP12.3□□□□□ -0.44
TNFSF13-202ENST00000349228 DIRC3C9JPN6 131 aa12.29□□□□□ -0.44
TNFSF13-202ENST00000349228 CCL21O00585 134 aa12.29□□□□□ -0.44
TNFSF13-202ENST00000349228 P01737 135 aa12.29□□□□□ -0.44
TNFSF13-202ENST00000349228 SLAQ13239 276 aa12.29□□□□□ -0.44
TNFSF13-202ENST00000349228 GSX1Q9H4S2 264 aaPredicted RBP12.29□□□□□ -0.44
TNFSF13-202ENST00000349228 TRAV30A0A087WSZ9 112 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 TIMM23O14925 209 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 NBR2O15453 112 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 NDUFA3O95167 84 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 CDKN1AP38936 164 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 KRTDAPP60985 99 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 BORCS7Q96B45 105 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 FAM103A1Q9BTL3 118 aaKnown RBP12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 CBLN4Q9NTU7 201 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 ZFHX4Q86UP3 3567 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 IGHV3-21A0A0B4J1V1 117 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 SIAH2O43255 324 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 APELAP0DMC3 54 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 HBBP68871 147 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 BPIFA4PQ86YQ2 179 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 RCHY1Q96PM5 261 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 ALKBH7Q9BT30 221 aaPredicted RBP12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
TNFSF13-202ENST00000349228 ARFGEF3Q5TH69 2177 aa12.27□□□□□ -0.44
TNFSF13-202ENST00000349228 NPIPB6E9PJ23 425 aa12.27□□□□□ -0.44
TNFSF13-202ENST00000349228 IGKV1-17P01599 117 aa12.27□□□□□ -0.44
TNFSF13-202ENST00000349228 HOXB4P17483 251 aaPredicted RBP12.27□□□□□ -0.44
TNFSF13-202ENST00000349228 CD33P20138 364 aa12.27□□□□□ -0.44
TNFSF13-202ENST00000349228 SNHG12Q9BXW3 62 aa12.27□□□□□ -0.44
TNFSF13-202ENST00000349228 OOSP1A8MZH6 123 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 K7EIM0 57 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 PMCHP20382 165 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 PRTN3P24158 256 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 DLX1P56177 255 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 NUTF2P61970 127 aaKnown RBP12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 KLRB1Q12918 225 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 GDF5OSQ5U4N7 250 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 RBPMS2Q6ZRY4 209 aaKnown RBP12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 OR4F17Q8NGA8 305 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 CFHR4Q92496 578 aa12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 ZNF48Q96MX3 618 aaPredicted RBP12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 CITED2Q99967 270 aaPredicted RBP12.27□□□□□ -0.45
TNFSF13-202ENST00000349228 LOC105371242A0A075B767 164 aa12.26□□□□□ -0.45
TNFSF13-202ENST00000349228 GPR6P46095 362 aaPredicted RBP12.26□□□□□ -0.45
TNFSF13-202ENST00000349228 DMRTA1Q5VZB9 504 aa12.26□□□□□ -0.45
TNFSF13-202ENST00000349228 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
TNFSF13-202ENST00000349228 NIT1Q86X76 327 aa12.26□□□□□ -0.45
TNFSF13-202ENST00000349228 Q8N976 141 aa12.26□□□□□ -0.45
TNFSF13-202ENST00000349228 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
TNFSF13-202ENST00000349228 NBEAQ8NFP9 2946 aa12.26□□□□□ -0.45
TNFSF13-202ENST00000349228 A4D1N5 150 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 ODF3BA8MYP8 253 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 H3BRN7 92 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 K7EQM0 130 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 EREGO14944 169 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 HSBP1O75506 76 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 CCDC144NLQ6NUI1 221 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 Q86TA4 180 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 SPENQ96T58 3664 aaKnown RBP12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 TRBV19A0A075B6N1 114 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 NPIPB5A8MRT5 1133 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 LEMD1Q68G75 181 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 TMEM75Q8N9X5 138 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 PAM16Q9Y3D7 125 aa12.25□□□□□ -0.45
TNFSF13-202ENST00000349228 CAMPP49913 170 aa12.24□□□□□ -0.45
TNFSF13-202ENST00000349228 FOXA3P55318 350 aaPredicted RBP12.24□□□□□ -0.45
TNFSF13-202ENST00000349228 ARF6P62330 175 aa12.24□□□□□ -0.45
TNFSF13-202ENST00000349228 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms