RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 GBGT1Q8N5D6 347 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 OR1B1Q8NGR6 318 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 ASB13Q8WXK3 278 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 U3KQE9 123 aa15.62■□□□□ 0.09
SMARCB1-202ENST00000344921 OR4C46A6NHA9 309 aa15.61■□□□□ 0.09
SMARCB1-202ENST00000344921 DNASE2O00115 360 aaPredicted RBP15.61■□□□□ 0.09
SMARCB1-202ENST00000344921 LINC00869P0C866 280 aa15.61■□□□□ 0.09
SMARCB1-202ENST00000344921 RPL12P30050 165 aaKnown RBP15.61■□□□□ 0.09
SMARCB1-202ENST00000344921 NUP62P37198 522 aaPredicted RBP15.61■□□□□ 0.09
SMARCB1-202ENST00000344921 NKX2-5P52952 324 aaPredicted RBP15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 RAP2BP61225 183 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 CLINT1Q14677 625 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 FAM90A2PQ658T7 463 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 ZNF546Q86UE3 836 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 WFDC3Q8IUB2 231 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 DOK5Q9P104 306 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 BUB3O43684 328 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 CAMLGP49069 296 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 VWC2Q2TAL6 325 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 C16orf54Q6UWD8 224 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 MGST2Q99735 147 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 WDR83OSQ9Y284 106 aa15.6■□□□□ 0.09
SMARCB1-202ENST00000344921 TCTE3Q8IZS6 198 aa15.59■□□□□ 0.09
SMARCB1-202ENST00000344921 STXBP6Q8NFX7 210 aa15.59■□□□□ 0.09
SMARCB1-202ENST00000344921 HELTA6NFD8 242 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 OR11H12B2RN74 326 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 OR5G3P0C626 314 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 LYL1P12980 280 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 FGF7P21781 194 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 S100A7P31151 101 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 AP2S1P53680 142 aaPredicted RBP15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 OR2T35Q8NGX2 323 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 ARL6Q9H0F7 186 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 MS4A6AQ9H2W1 248 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 TUBA4BQ9H853 241 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 HSPB11Q9Y547 144 aa15.58■□□□□ 0.08
SMARCB1-202ENST00000344921 HYPMO75409 117 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 IGHV4-30-4P0DP06 118 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 GLMPQ8WWB7 406 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 UBQLN2Q9UHD9 624 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 SLC45A2Q9UMX9 530 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 Q5BKY6 102 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 SIGLEC15Q6ZMC9 328 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 SMIM3Q9BZL3 60 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 SLC25A22Q9H936 323 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 HIGD1AQ9Y241 93 aa15.57■□□□□ 0.08
SMARCB1-202ENST00000344921 Q6ZRG5 221 aa15.56■□□□□ 0.08
SMARCB1-202ENST00000344921 OR8I2Q8N0Y5 310 aa15.56■□□□□ 0.08
SMARCB1-202ENST00000344921 DEFB125Q8N687 156 aa15.56■□□□□ 0.08
SMARCB1-202ENST00000344921 STPG3Q8N7X2 389 aa15.56■□□□□ 0.08
SMARCB1-202ENST00000344921 WFDC10AQ9H1F0 79 aa15.56■□□□□ 0.08
SMARCB1-202ENST00000344921 MPDU1O75352 247 aa15.55■□□□□ 0.08
SMARCB1-202ENST00000344921 S100A7AQ86SG5 101 aa15.55■□□□□ 0.08
SMARCB1-202ENST00000344921 ATP5SQ99766 215 aa15.55■□□□□ 0.08
SMARCB1-202ENST00000344921 GGTLC1Q9BX51 225 aa15.55■□□□□ 0.08
SMARCB1-202ENST00000344921 FBXL17Q9UF56 701 aa15.55■□□□□ 0.08
SMARCB1-202ENST00000344921 PLP1P60201 277 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 C1orf194Q5T5A4 169 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 MIC13Q5XKP0 118 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 PRKDCP78527 4128 aaKnown RBP15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 FXYD6-FXYD2A0A087WZ82 144 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 ZNF98A6NK75 572 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 FRMD6-AS1P0C7T7 363 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 PXDC1Q5TGL8 231 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 UHRF2Q96PU4 802 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 SLC25A39Q9BZJ4 359 aaPredicted RBP15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 ARV1Q9H2C2 271 aa15.54■□□□□ 0.08
SMARCB1-202ENST00000344921 COX7A2P2O60397 106 aa15.53■□□□□ 0.08
SMARCB1-202ENST00000344921 INO80EQ8NBZ0 244 aaPredicted RBP15.53■□□□□ 0.08
SMARCB1-202ENST00000344921 NPCDR1Q9BY65 106 aa15.53■□□□□ 0.08
SMARCB1-202ENST00000344921 SRD5A3Q9H8P0 318 aa15.53■□□□□ 0.08
SMARCB1-202ENST00000344921 IFNA5P01569 189 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 RPL29P47914 159 aaKnown RBP15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 CMC4P56277 68 aaPredicted RBP15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 B2MP61769 119 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 OPCMLQ14982 345 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 LEMD1Q68G75 181 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 ZNF709Q8N972 641 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 B9D2Q9BPU9 175 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 SCRT1Q9BWW7 348 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 WDR61Q9GZS3 305 aaKnown RBP15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 NRN1Q9NPD7 142 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 PXMP4Q9Y6I8 212 aa15.52■□□□□ 0.08
SMARCB1-202ENST00000344921 TRAV2A0A0B4J234 112 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 ODF3L2Q3SX64 289 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 SCGB1C1Q8TD33 95 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 C19orf73Q9NVV2 129 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 ELOA3CA0A087WX78 387 aaPredicted RBP15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 A8MZ25 164 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 H3BRN7 92 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 GALR1P47211 349 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 PRR20EP86478 221 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 PRR20CP86479 221 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 PRR20DP86480 221 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 PRR20BP86481 221 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 PRR20AP86496 221 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 C10orf113Q5VZT2 155 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 PATE2Q6UY27 113 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 LINC00305Q7Z4B0 112 aa15.51■□□□□ 0.07
SMARCB1-202ENST00000344921 AQP10Q96PS8 301 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms