RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 RIGQ13278 110 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 FA2HQ7L5A8 372 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 OR4X2Q8NGF9 303 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 VSTM2AQ8TAG5 236 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 NPFFR1Q9GZQ6 430 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 ZNRD1Q9P1U0 126 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 RPH3ALQ9UNE2 315 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 RAI1Q7Z5J4 1906 aaPredicted RBP7.73□□□□□ -1.17
HOXA1-201ENST00000343060 H3BUT2 72 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 RND1Q92730 232 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 SSUH2Q9Y2M2 353 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 U3KQK5 164 aa7.73□□□□□ -1.17
HOXA1-201ENST00000343060 A0A1W2PPM0 123 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 IGLV2-23P01705 113 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 CSN3P07498 182 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 UQCRFS1P47985 274 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 ZNF788Q6ZQV5 615 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 MAFAQ8NHW3 353 aaPredicted RBP7.72□□□□□ -1.17
HOXA1-201ENST00000343060 JKAMPQ9P055 326 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 TMEM14CQ9P0S9 112 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 A0A1W2PNU3 283 aaPredicted RBP7.72□□□□□ -1.17
HOXA1-201ENST00000343060 A1L4Q6 167 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 SNAI2O43623 268 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 ARMS2P0C7Q2 107 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 ORM2P19652 201 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 LGALS7P47929 136 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 C10orf55Q5SWW7 151 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 FAM201AQ5SY85 155 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 Q6AWC8 147 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 CIARTQ8N365 385 aaPredicted RBP7.72□□□□□ -1.17
HOXA1-201ENST00000343060 CNEP1R1Q8N9A8 125 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 TMEM178AQ8NBL3 297 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 ABHD17AQ96GS6 310 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 RNF7Q9UBF6 113 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 SLC25A15Q9Y619 301 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 LINC00312Q9Y6C7 94 aa7.72□□□□□ -1.17
HOXA1-201ENST00000343060 AHCTF1Q8WYP5 2266 aa7.71□□□□□ -1.17
HOXA1-201ENST00000343060 NAV3Q8IVL0 2385 aa7.71□□□□□ -1.17
HOXA1-201ENST00000343060 IGLV3-9A0A075B6K5 115 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 A0A1W2PPI3 338 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 PAX8Q06710 450 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 C9orf106Q8NAJ2 232 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 TMEM116Q8NCL8 245 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 OR4C13Q8NGP0 309 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 PIFOQ8TCI5 191 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 FLYWCH2Q96CP2 140 aaKnown RBP7.71□□□□□ -1.18
HOXA1-201ENST00000343060 FER1L6-AS2Q96M78 137 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 PLSCR4Q9NRQ2 329 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 FRYQ5TBA9 3013 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 IGHV3-48P01763 117 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 MRGPRG-AS1Q2M3A8 158 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 RUSC1-AS1Q66K80 236 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 CLEC2AQ6UVW9 174 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 BHLHA15Q7RTS1 189 aaPredicted RBP7.71□□□□□ -1.18
HOXA1-201ENST00000343060 ZADH2Q8N4Q0 377 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 C8orf46Q8TAG6 207 aa7.71□□□□□ -1.18
HOXA1-201ENST00000343060 COL25A1Q9BXS0 654 aaPredicted RBP7.71□□□□□ -1.18
HOXA1-201ENST00000343060 ZNF71Q9NQZ8 489 aaPredicted RBP7.71□□□□□ -1.18
HOXA1-201ENST00000343060 TRAV8-1A0A0A6YYK1 113 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 hADV38S2A0JD32 116 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 TMEM189A5PLL7 270 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 NDUFS8O00217 210 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 CT45A10P0DMU9 189 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 Q71RC1 249 aaPredicted RBP7.7□□□□□ -1.18
HOXA1-201ENST00000343060 FAM216BQ8N7L0 139 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 TMEM75Q8N9X5 138 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 PRSS3P2Q8NHM4 247 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 SPOCK3Q9BQ16 436 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 INSIG2Q9Y5U4 225 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 SPCS1Q9Y6A9 102 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 KLK10O43240 276 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 PPIAL4GP0DN37 164 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 LOXL1Q08397 574 aaPredicted RBP7.7□□□□□ -1.18
HOXA1-201ENST00000343060 TEX36Q5VZQ5 186 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 UBALD2Q8IYN6 164 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 SIGLEC8Q9NYZ4 499 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 HILPDAQ9Y5L2 63 aa7.7□□□□□ -1.18
HOXA1-201ENST00000343060 PRR33A8MZF0 331 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 SPRY3O43610 288 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 FAM106CPP0CH98 169 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 GLRXP35754 106 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 NHLH1Q02575 133 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 FAM106AQ4KMX7 169 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 WFDC8Q8IUA0 241 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 LINC00311Q8N616 119 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 C8orf31Q8N9H6 132 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 TMEM186Q96B77 213 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 CCL13Q99616 98 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 THYN1Q9P016 225 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 HEATR1Q9H583 2144 aaKnown RBP7.69□□□□□ -1.18
HOXA1-201ENST00000343060 THBDP07204 575 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 IFI27P40305 119 aaPredicted RBP7.69□□□□□ -1.18
HOXA1-201ENST00000343060 MEF2CQ06413 473 aaPredicted RBP7.69□□□□□ -1.18
HOXA1-201ENST00000343060 PSG3Q16557 428 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 C3orf36Q3SXR2 165 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 PSMG4Q5JS54 123 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 GOLT1AQ6ZVE7 132 aa7.69□□□□□ -1.18
HOXA1-201ENST00000343060 PRNTQ86SH4 94 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms