RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 NBEAL2Q6ZNJ1 2754 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 TRAV2A0A0B4J234 112 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 AGPAT2O15120 278 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 MPC2O95563 127 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 AP2S1P53680 142 aaPredicted RBP11.33□□□□□ -0.6
UBE3B-201ENST00000340074 HBG1P69891 147 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 HBG2P69892 147 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 NHLH2Q02577 135 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 OXA1LQ15070 435 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 SIGLEC15Q6ZMC9 328 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 APRG1Q8IVJ8 170 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 OR11H7Q8NGC8 314 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 OR1B1Q8NGR6 318 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 DCANP1Q8TF63 244 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 RNF126Q9BV68 326 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 MAP6D1Q9H9H5 199 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 DOK5Q9P104 306 aa11.33□□□□□ -0.6
UBE3B-201ENST00000340074 HUWE1Q7Z6Z7 4374 aaKnown RBP11.33□□□□□ -0.6
UBE3B-201ENST00000340074 K7EQG2 157 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 LINC00869P0C866 280 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 CMC4P56277 68 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-201ENST00000340074 SELENOTP62341 195 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 EWSR1Q01844 656 aaKnown RBP eCLIP11.32□□□□□ -0.6
UBE3B-201ENST00000340074 FCN2Q15485 313 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 ZNF124Q15973 351 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 VWC2Q2TAL6 325 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 MGST2Q99735 147 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 SLC25A31Q9H0C2 315 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 UQCC1Q9NVA1 299 aa11.32□□□□□ -0.6
UBE3B-201ENST00000340074 TENM3Q9P273 2699 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 UBE2L5PA0A1B0GUS4 154 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 PET100P0DJ07 73 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 C1orf194Q5T5A4 169 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 ZNF546Q86UE3 836 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 TM2D3Q9BRN9 247 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 TMEM147Q9BVK8 224 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 SLC45A2Q9UMX9 530 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 U3KQK5 164 aa11.31□□□□□ -0.6
UBE3B-201ENST00000340074 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-201ENST00000340074 ZNF98A6NK75 572 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 DEFB131AP59861 70 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 PLP1P60201 277 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 ATP6V1FQ16864 119 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 OR8I2Q8N0Y5 310 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 OR5C1Q8NGR4 320 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 ARL6Q9H0F7 186 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 ZMAT4Q9H898 229 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 FBXL17Q9UF56 701 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 WDR83OSQ9Y284 106 aa11.3□□□□□ -0.6
UBE3B-201ENST00000340074 HYPMO75409 117 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 OR5G3P0C626 314 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 ZNF688P0C7X2 276 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 CAMLGP49069 296 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 RAP2BP61225 183 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 BAXQ07812 192 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 SLC25A39Q9BZJ4 359 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-201ENST00000340074 MBD2Q9UBB5 411 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 HIGD1AQ9Y241 93 aa11.29□□□□□ -0.6
UBE3B-201ENST00000340074 H3BRN7 92 aa11.28□□□□□ -0.6
UBE3B-201ENST00000340074 S100A7P31151 101 aa11.28□□□□□ -0.6
UBE3B-201ENST00000340074 RAB31Q13636 194 aa11.28□□□□□ -0.6
UBE3B-201ENST00000340074 PATE2Q6UY27 113 aa11.28□□□□□ -0.6
UBE3B-201ENST00000340074 RCHY1Q96PM5 261 aa11.28□□□□□ -0.6
UBE3B-201ENST00000340074 UHRF2Q96PU4 802 aa11.28□□□□□ -0.6
UBE3B-201ENST00000340074 SLC25A32Q9H2D1 315 aa11.28□□□□□ -0.6
UBE3B-201ENST00000340074 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.6
UBE3B-201ENST00000340074 FGF7P21781 194 aa11.27□□□□□ -0.6
UBE3B-201ENST00000340074 CLINT1Q14677 625 aa11.27□□□□□ -0.6
UBE3B-201ENST00000340074 PXDC1Q5TGL8 231 aa11.27□□□□□ -0.6
UBE3B-201ENST00000340074 MIC13Q5XKP0 118 aa11.27□□□□□ -0.6
UBE3B-201ENST00000340074 SPATA25Q9BR10 227 aa11.27□□□□□ -0.6
UBE3B-201ENST00000340074 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.6
UBE3B-201ENST00000340074 ARV1Q9H2C2 271 aa11.27□□□□□ -0.6
UBE3B-201ENST00000340074 LYL1P12980 280 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 RPL12P30050 165 aaKnown RBP11.26□□□□□ -0.61
UBE3B-201ENST00000340074 PRR20EP86478 221 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 PRR20CP86479 221 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 PRR20DP86480 221 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 PRR20BP86481 221 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 PRR20AP86496 221 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 THAP6Q8TBB0 222 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 RETNQ9HD89 108 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 HSPB11Q9Y547 144 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 COX7A2P2O60397 106 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 MPDU1O75352 247 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 GALR1P47211 349 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
UBE3B-201ENST00000340074 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
UBE3B-201ENST00000340074 OPCMLQ14982 345 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 PSMG4Q5JS54 123 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
UBE3B-201ENST00000340074 STAB2Q8WWQ8 2551 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 SOCS3O14543 225 aa11.25□□□□□ -0.61
UBE3B-201ENST00000340074 GIPP09681 153 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms