RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 GGTLC1Q9BX51 225 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 WFDC10AQ9H1F0 79 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 PFDN2Q9UHV9 154 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 SLC45A2Q9UMX9 530 aa9.61□□□□□ -0.87
SRSF3-201ENST00000339436 NBEAL2Q6ZNJ1 2754 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 A8MZ25 164 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 PLP1P60201 277 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 RAP2BP61225 183 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 OR1B1Q8NGR6 318 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 THAP6Q8TBB0 222 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 MS4A6AQ9H2W1 248 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 C19orf73Q9NVV2 129 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 HSPB11Q9Y547 144 aa9.6□□□□□ -0.87
SRSF3-201ENST00000339436 TRAV2A0A0B4J234 112 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 HELTA6NFD8 242 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 FRMD6-AS1P0C7T7 363 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 ORM2P19652 201 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 RPL12P30050 165 aaKnown RBP9.59□□□□□ -0.87
SRSF3-201ENST00000339436 CAMLGP49069 296 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 RPL11P62913 178 aaKnown RBP9.59□□□□□ -0.87
SRSF3-201ENST00000339436 FGL1Q08830 312 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 CLINT1Q14677 625 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 ODF3L2Q3SX64 289 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 PPP1R14BQ96C90 147 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 B9D2Q9BPU9 175 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 DOK5Q9P104 306 aa9.59□□□□□ -0.87
SRSF3-201ENST00000339436 OR11H12B2RN74 326 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 MPDU1O75352 247 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 FGF7P21781 194 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 TFPI2P48307 235 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 PAFAH1B2P68402 229 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 RAB31Q13636 194 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 C1orf194Q5T5A4 169 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 SIGLEC15Q6ZMC9 328 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 FAM110AQ9BQ89 295 aa9.58□□□□□ -0.88
SRSF3-201ENST00000339436 H3BRN7 92 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 HYPMO75409 117 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 S100A7P31151 101 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 PRR20EP86478 221 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 PRR20CP86479 221 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 PRR20DP86480 221 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 PRR20BP86481 221 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 PRR20AP86496 221 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 OPCMLQ14982 345 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 Q5BKY6 102 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 PXDC1Q5TGL8 231 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 DEFB125Q8N687 156 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 OR2T35Q8NGX2 323 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 DCANP1Q8TF63 244 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 CHAC2Q8WUX2 184 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 ATP5SQ99766 215 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 SCRT1Q9BWW7 348 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 NPCDR1Q9BY65 106 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 ARL6Q9H0F7 186 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 FBXL17Q9UF56 701 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 HIGD1AQ9Y241 93 aa9.57□□□□□ -0.88
SRSF3-201ENST00000339436 ZNF98A6NK75 572 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 G3V3Q6 166 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 K7EQG2 157 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 DNASE2O00115 360 aaPredicted RBP9.56□□□□□ -0.88
SRSF3-201ENST00000339436 OR5G3P0C626 314 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 AP2S1P53680 142 aaPredicted RBP9.56□□□□□ -0.88
SRSF3-201ENST00000339436 MIC13Q5XKP0 118 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 OR8I2Q8N0Y5 310 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 AQP10Q96PS8 301 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 UHRF2Q96PU4 802 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 SHANK2-AS3Q9BTD1 123 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 SLC25A39Q9BZJ4 359 aaPredicted RBP9.56□□□□□ -0.88
SRSF3-201ENST00000339436 SLC25A32Q9H2D1 315 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 TUBA4BQ9H853 241 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 SRD5A3Q9H8P0 318 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 MAP6D1Q9H9H5 199 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 NRN1Q9NPD7 142 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 UBQLN2Q9UHD9 624 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 BOLA1Q9Y3E2 137 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 RPL29P47914 159 aaKnown RBP9.56□□□□□ -0.88
SRSF3-201ENST00000339436 B2MP61769 119 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 PATE2Q6UY27 113 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 WFDC3Q8IUB2 231 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 FAM24BQ8N5W8 94 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 SMIM3Q9BZL3 60 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 WDR61Q9GZS3 305 aaKnown RBP9.56□□□□□ -0.88
SRSF3-201ENST00000339436 ARV1Q9H2C2 271 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 SLC25A22Q9H936 323 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 PXMP4Q9Y6I8 212 aa9.56□□□□□ -0.88
SRSF3-201ENST00000339436 COX7A2P2O60397 106 aa9.55□□□□□ -0.88
SRSF3-201ENST00000339436 LEMD1Q68G75 181 aa9.55□□□□□ -0.88
SRSF3-201ENST00000339436 S100A7AQ86SG5 101 aa9.55□□□□□ -0.88
SRSF3-201ENST00000339436 TMEM37Q8WXS4 190 aa9.55□□□□□ -0.88
SRSF3-201ENST00000339436 SLC39A9Q9NUM3 307 aa9.55□□□□□ -0.88
SRSF3-201ENST00000339436 ELOA3CA0A087WX78 387 aaPredicted RBP9.54□□□□□ -0.88
SRSF3-201ENST00000339436 FXYD6-FXYD2A0A087WZ82 144 aa9.54□□□□□ -0.88
SRSF3-201ENST00000339436 RBMY1BA6NDE4 496 aaKnown RBP9.54□□□□□ -0.88
SRSF3-201ENST00000339436 RBMY1EA6NEQ0 496 aaKnown RBP9.54□□□□□ -0.88
SRSF3-201ENST00000339436 RBMY1DP0C7P1 496 aaKnown RBP9.54□□□□□ -0.88
SRSF3-201ENST00000339436 GALR1P47211 349 aa9.54□□□□□ -0.88
SRSF3-201ENST00000339436 LINC00322Q6ZN03 302 aaPredicted RBP9.54□□□□□ -0.88
SRSF3-201ENST00000339436 Q6ZRG5 221 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms