RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 DNAL4O96015 105 aa11.27□□□□□ -0.61
RTN4-202ENST00000337526 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
RTN4-202ENST00000337526 MLANAQ16655 118 aa11.27□□□□□ -0.61
RTN4-202ENST00000337526 ZNF664Q8N3J9 261 aa11.27□□□□□ -0.61
RTN4-202ENST00000337526 TMEM178BH3BS89 294 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 C3orf79P0CE67 100 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 EMP1P54849 157 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 ORAOV1Q8WV07 137 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 CRIM1Q9NZV1 1036 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 ANAPC10Q9UM13 185 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 CD7P09564 240 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 EVI2AP22794 236 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 ZNF672Q499Z4 452 aaPredicted RBP11.26□□□□□ -0.61
RTN4-202ENST00000337526 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 OR2K2Q8NGT1 345 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 MEGF9Q9H1U4 602 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 LIME1Q9H400 295 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 GTF3C1Q12789 2109 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 FNDC1Q4ZHG4 1894 aaPredicted RBP11.26□□□□□ -0.61
RTN4-202ENST00000337526 TRAV21A0A0B4J279 112 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 F2Z2F3 143 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 RNASE1P07998 156 aaKnown RBP11.26□□□□□ -0.61
RTN4-202ENST00000337526 LDLRAD2Q5SZI1 272 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 NUP35Q8NFH5 326 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 TRGV9Q99603 122 aa11.26□□□□□ -0.61
RTN4-202ENST00000337526 TSC2P49815 1807 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 MALRD1Q5VYJ5 2156 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 H0YJW9 148 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 KLF17Q5JT82 389 aaPredicted RBP11.25□□□□□ -0.61
RTN4-202ENST00000337526 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 JMJD8Q96S16 334 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 TRAV8-1A0A0A6YYK1 113 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 IGHV1-3A0A0C4DH29 117 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 OR13C6PQ8NH95 151 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 YLPM1P49750 1951 aaKnown RBP11.25□□□□□ -0.61
RTN4-202ENST00000337526 IGKV1-16P04430 117 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 MS4A6AQ9H2W1 248 aa11.25□□□□□ -0.61
RTN4-202ENST00000337526 THBDP07204 575 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 ITLN2Q8WWU7 325 aaPredicted RBP11.24□□□□□ -0.61
RTN4-202ENST00000337526 TGFAP01135 160 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 PFN1P07737 140 aaKnown RBP11.24□□□□□ -0.61
RTN4-202ENST00000337526 MTURNQ8N3F0 131 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 PAX9P55771 341 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 SEC11AP67812 179 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 ORMDL2Q53FV1 153 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 LINC00527Q9UJ94 153 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 CYSLTR1Q9Y271 337 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 IGKV2-40A0A087WW87 121 aaPredicted RBP11.24□□□□□ -0.61
RTN4-202ENST00000337526 IGKV2D-40P01614 121 aaPredicted RBP11.24□□□□□ -0.61
RTN4-202ENST00000337526 SAMD13Q5VXD3 122 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 VCX2Q9H322 139 aa11.24□□□□□ -0.61
RTN4-202ENST00000337526 SPG11Q96JI7 2443 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 D6R8Y8 96 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 NDUFS6O75380 124 aaKnown RBP11.23□□□□□ -0.61
RTN4-202ENST00000337526 RNASE2P10153 161 aaKnown RBP11.23□□□□□ -0.61
RTN4-202ENST00000337526 LINC00479Q96M42 142 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 DLEU1O43261 78 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
RTN4-202ENST00000337526 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 C2orf88Q9BSF0 95 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 A0A1B0GV72 72 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 NCR2O95944 276 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 WNT2P09544 360 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 DMRTC2Q8IXT2 367 aaPredicted RBP11.23□□□□□ -0.61
RTN4-202ENST00000337526 GAFA1Q96PS6 74 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 IGKCP01834 107 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 LYZL1Q6UWQ5 148 aa11.23□□□□□ -0.61
RTN4-202ENST00000337526 MRPS16Q9Y3D3 137 aaKnown RBP11.23□□□□□ -0.61
RTN4-202ENST00000337526 MGAMO43451 1857 aa11.22□□□□□ -0.61
RTN4-202ENST00000337526 PAX8Q06710 450 aa11.22□□□□□ -0.61
RTN4-202ENST00000337526 RSPO1Q2MKA7 263 aaPredicted RBP11.22□□□□□ -0.61
RTN4-202ENST00000337526 MBD3L4A6NDZ8 208 aaPredicted RBP11.22□□□□□ -0.61
RTN4-202ENST00000337526 MBD3L3A6NE82 208 aaPredicted RBP11.22□□□□□ -0.61
RTN4-202ENST00000337526 MBD3L5A6NJ08 208 aaPredicted RBP11.22□□□□□ -0.61
RTN4-202ENST00000337526 MBD3L2Q8NHZ7 208 aaPredicted RBP11.22□□□□□ -0.61
RTN4-202ENST00000337526 RNF5Q99942 180 aa11.22□□□□□ -0.61
RTN4-202ENST00000337526 IGHG3P01860 377 aa11.22□□□□□ -0.61
RTN4-202ENST00000337526 IFI27P40305 119 aaPredicted RBP11.22□□□□□ -0.61
RTN4-202ENST00000337526 HSD52Q0P140 79 aa11.22□□□□□ -0.61
RTN4-202ENST00000337526 LINC01587Q99440 93 aa11.22□□□□□ -0.61
RTN4-202ENST00000337526 MRPL27Q9P0M9 148 aaKnown RBP11.22□□□□□ -0.61
RTN4-202ENST00000337526 SIGLEC9Q9Y336 463 aa11.22□□□□□ -0.61
RTN4-202ENST00000337526 TMEM262E9PQX1 116 aa11.21□□□□□ -0.61
RTN4-202ENST00000337526 H3BRM9 83 aa11.21□□□□□ -0.61
RTN4-202ENST00000337526 VOPP1Q96AW1 172 aa11.21□□□□□ -0.61
RTN4-202ENST00000337526 PTPRQQ9UMZ3 2332 aa11.21□□□□□ -0.61
RTN4-202ENST00000337526 hDV102S1A0JD36 115 aa11.21□□□□□ -0.62
RTN4-202ENST00000337526 TMEM101Q96IK0 257 aa11.21□□□□□ -0.62
RTN4-202ENST00000337526 HELZP42694 1942 aaKnown RBP11.21□□□□□ -0.62
RTN4-202ENST00000337526 COL4A6Q14031 1691 aa11.21□□□□□ -0.62
RTN4-202ENST00000337526 FNDC10F2Z333 226 aa11.21□□□□□ -0.62
RTN4-202ENST00000337526 LMO1P25800 156 aa11.21□□□□□ -0.62
RTN4-202ENST00000337526 THSD7BQ9C0I4 1608 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 ZNF138P52744 262 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 MPV17L2Q567V2 206 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 ZNF474Q6S9Z5 364 aaPredicted RBP11.2□□□□□ -0.62
RTN4-202ENST00000337526 OR9G4Q8NGQ1 327 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 TMEM190Q8WZ59 177 aa11.2□□□□□ -0.62
RTN4-202ENST00000337526 TOMM7Q9P0U1 55 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms