RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ZNF207O43670 478 aaKnown RBP16.42■□□□□ 0.22
TPM1-204ENST00000334895 COX7A2P2O60397 106 aa16.42■□□□□ 0.22
TPM1-204ENST00000334895 EIF3GO75821 320 aaKnown RBP eCLIP16.42■□□□□ 0.22
TPM1-204ENST00000334895 OR5G3P0C626 314 aa16.42■□□□□ 0.22
TPM1-204ENST00000334895 SYNJ2BPP57105 145 aa16.42■□□□□ 0.22
TPM1-204ENST00000334895 MORN5Q5VZ52 161 aa16.42■□□□□ 0.22
TPM1-204ENST00000334895 SPATA31B1PQ5VZV4 182 aa16.42■□□□□ 0.22
TPM1-204ENST00000334895 SEPSECSQ9HD40 501 aaKnown RBP16.42■□□□□ 0.22
TPM1-204ENST00000334895 ZNF320A2RRD8 509 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 MBP02144 154 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 ZNF726P1Q15940 193 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 FAM106AQ4KMX7 169 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 C10orf113Q5VZT2 155 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 SSX7Q7RTT5 188 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 REC114Q7Z4M0 266 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 C1QL4Q86Z23 238 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 OR1L4Q8NGR5 311 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 GATAD1Q8WUU5 269 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 ELOA3CA0A087WX78 387 aaPredicted RBP16.41■□□□□ 0.22
TPM1-204ENST00000334895 IFNA7P01567 189 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 EDN2P20800 178 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 FAM122CQ6P4D5 195 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 DLX4Q92988 240 aaPredicted RBP16.41■□□□□ 0.22
TPM1-204ENST00000334895 PFDN5Q99471 154 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 HIGD1AQ9Y241 93 aa16.41■□□□□ 0.22
TPM1-204ENST00000334895 WNK1Q9H4A3 2382 aa16.4■□□□□ 0.22
TPM1-204ENST00000334895 LGALS9O00182 355 aa16.4■□□□□ 0.22
TPM1-204ENST00000334895 TM4SF20Q53R12 229 aa16.4■□□□□ 0.22
TPM1-204ENST00000334895 FAM78BQ5VT40 261 aa16.4■□□□□ 0.22
TPM1-204ENST00000334895 SLC25A39Q9BZJ4 359 aaPredicted RBP16.4■□□□□ 0.22
TPM1-204ENST00000334895 RABAC1Q9UI14 185 aa16.4■□□□□ 0.22
TPM1-204ENST00000334895 A8MWP6 167 aa16.39■□□□□ 0.21
TPM1-204ENST00000334895 SEC14L6B5MCN3 397 aa16.39■□□□□ 0.21
TPM1-204ENST00000334895 APOHP02749 345 aaPredicted RBP16.39■□□□□ 0.21
TPM1-204ENST00000334895 MYCNOSP40205 109 aa16.39■□□□□ 0.21
TPM1-204ENST00000334895 MIR17HGQ75NE6 70 aa16.39■□□□□ 0.21
TPM1-204ENST00000334895 LINC00305Q7Z4B0 112 aa16.39■□□□□ 0.21
TPM1-204ENST00000334895 FAM213BQ8TBF2 198 aa16.39■□□□□ 0.21
TPM1-204ENST00000334895 SLC25A22Q9H936 323 aa16.39■□□□□ 0.21
TPM1-204ENST00000334895 TMEM213A2RRL7 107 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 H3BRN7 92 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 CRYBB3P26998 211 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 RAB5CP51148 216 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 SHANK2-AS3Q9BTD1 123 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 SCRT1Q9BWW7 348 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 UBQLN2Q9UHD9 624 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 FUT9Q9Y231 359 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 U3KQE9 123 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 ANK2Q01484 3957 aa16.38■□□□□ 0.21
TPM1-204ENST00000334895 IGHV3-49A0A0A0MS15 119 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 TRAV5A0A0B4J249 113 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 K7EMT4 169 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 RHOBP62745 196 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 LEMD1Q68G75 181 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 RNF141Q8WVD5 230 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 METTL26Q96S19 204 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 DAZ1Q9NQZ3 744 aaKnown RBP16.37■□□□□ 0.21
TPM1-204ENST00000334895 UFC1Q9Y3C8 167 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 CDC34P49427 236 aaPredicted RBP16.37■□□□□ 0.21
TPM1-204ENST00000334895 DPPA3Q6W0C5 159 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 RAB24Q969Q5 203 aa16.37■□□□□ 0.21
TPM1-204ENST00000334895 MRPL32Q9BYC8 188 aaKnown RBP16.37■□□□□ 0.21
TPM1-204ENST00000334895 VWFP04275 2813 aa16.36■□□□□ 0.21
TPM1-204ENST00000334895 IGHV3OR16-13A0A075B7E8 117 aa16.36■□□□□ 0.21
TPM1-204ENST00000334895 IGHV3-74A0A0B4J1X5 117 aa16.36■□□□□ 0.21
TPM1-204ENST00000334895 HMGB3O15347 200 aaKnown RBP16.36■□□□□ 0.21
TPM1-204ENST00000334895 NPPCP23582 126 aa16.36■□□□□ 0.21
TPM1-204ENST00000334895 SHISA2Q6UWI4 295 aa16.36■□□□□ 0.21
TPM1-204ENST00000334895 ZNF767PQ75MW2 155 aa16.36■□□□□ 0.21
TPM1-204ENST00000334895 PCNPQ8WW12 178 aaKnown RBP16.36■□□□□ 0.21
TPM1-204ENST00000334895 FAM167A-AS1Q96KT0 104 aa16.36■□□□□ 0.21
TPM1-204ENST00000334895 RNF2Q99496 336 aa16.36■□□□□ 0.21
TPM1-204ENST00000334895 ACTR3CQ9C0K3 210 aaPredicted RBP16.36■□□□□ 0.21
TPM1-204ENST00000334895 IGHV3-66A0A0C4DH42 116 aa16.35■□□□□ 0.21
TPM1-204ENST00000334895 A0A1W2PPV4 95 aa16.35■□□□□ 0.21
TPM1-204ENST00000334895 ZNF98A6NK75 572 aa16.35■□□□□ 0.21
TPM1-204ENST00000334895 ZNF705EA8MWA4 302 aaPredicted RBP16.35■□□□□ 0.21
TPM1-204ENST00000334895 RGS13O14921 159 aa16.35■□□□□ 0.21
TPM1-204ENST00000334895 IL34Q6ZMJ4 242 aa16.35■□□□□ 0.21
TPM1-204ENST00000334895 OR9G4Q8NGQ1 327 aa16.35■□□□□ 0.21
TPM1-204ENST00000334895 SLC25A2Q9BXI2 301 aa16.35■□□□□ 0.21
TPM1-204ENST00000334895 IGHV7-4-1A0A0J9YVY3 117 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 CTXND1A0A1B0GTU2 59 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 BUB3O43684 328 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 ADAMTSL5Q6ZMM2 481 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 C2orf70A6NJV1 201 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 OR4F17Q8NGA8 305 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 ZNF503Q96F45 646 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 OR4F4Q96R69 305 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 SMPXQ9UHP9 88 aa16.34■□□□□ 0.21
TPM1-204ENST00000334895 NMBP08949 121 aa16.33■□□□□ 0.2
TPM1-204ENST00000334895 STAG3L2P0CL84 134 aa16.33■□□□□ 0.2
TPM1-204ENST00000334895 STAG3L3P0CL85 134 aa16.33■□□□□ 0.2
TPM1-204ENST00000334895 C8orf88P0DMB2 117 aa16.33■□□□□ 0.2
TPM1-204ENST00000334895 S100A7P31151 101 aa16.33■□□□□ 0.2
TPM1-204ENST00000334895 LCN15Q6UWW0 184 aa16.33■□□□□ 0.2
TPM1-204ENST00000334895 LINC00482Q8N8I6 264 aa16.33■□□□□ 0.2
TPM1-204ENST00000334895 MBD3L1Q8WWY6 194 aa16.33■□□□□ 0.2
TPM1-204ENST00000334895 TECRQ9NZ01 308 aaKnown RBP16.33■□□□□ 0.2
TPM1-204ENST00000334895 PF4P02776 101 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms