RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RNF114Q9Y508 228 aa12.18□□□□□ -0.46
C9orf47-201ENST00000334490 ZNF98A6NK75 572 aa12.18□□□□□ -0.46
C9orf47-201ENST00000334490 PPP1R17O96001 155 aa12.18□□□□□ -0.46
C9orf47-201ENST00000334490 LYRM7Q5U5X0 104 aa12.18□□□□□ -0.46
C9orf47-201ENST00000334490 DPH3Q96FX2 82 aa12.18□□□□□ -0.46
C9orf47-201ENST00000334490 C5orf52A6NGY3 159 aa12.17□□□□□ -0.46
C9orf47-201ENST00000334490 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
C9orf47-201ENST00000334490 MLANAQ16655 118 aa12.17□□□□□ -0.46
C9orf47-201ENST00000334490 SPATA31B1PQ5VZV4 182 aa12.17□□□□□ -0.46
C9orf47-201ENST00000334490 ADAMTS9Q9P2N4 1935 aa12.17□□□□□ -0.46
C9orf47-201ENST00000334490 MGST2Q99735 147 aa12.17□□□□□ -0.46
C9orf47-201ENST00000334490 NCOR1P1Q9H4R4 102 aa12.17□□□□□ -0.46
C9orf47-201ENST00000334490 RNASE2P10153 161 aaKnown RBP12.17□□□□□ -0.46
C9orf47-201ENST00000334490 RPL23P62829 140 aaKnown RBP12.17□□□□□ -0.46
C9orf47-201ENST00000334490 A0A1W2PPI3 338 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 ATP6V0E1O15342 81 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 STAG3L2P0CL84 134 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 STAG3L3P0CL85 134 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 CFPP27918 469 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 PPIFP30405 207 aaKnown RBP12.16□□□□□ -0.46
C9orf47-201ENST00000334490 C17orf58Q2M2W7 97 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 OR5AN1Q8NGI8 311 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 SEPSECSQ9HD40 501 aaKnown RBP12.16□□□□□ -0.46
C9orf47-201ENST00000334490 PEF1Q9UBV8 284 aaKnown RBP12.16□□□□□ -0.46
C9orf47-201ENST00000334490 OVOL3O00110 214 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 FAM223BA6NKX1 122 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 PRSS2P07478 247 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 CMC4P56277 68 aaPredicted RBP12.16□□□□□ -0.46
C9orf47-201ENST00000334490 FAM223AQ8IWN6 122 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 EXOC3-AS1Q8N2X6 119 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 MBD3L1Q8WWY6 194 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 CD5P06127 495 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 SUMO2P61956 95 aaKnown RBP12.16□□□□□ -0.46
C9orf47-201ENST00000334490 DEFB121Q5J5C9 76 aa12.16□□□□□ -0.46
C9orf47-201ENST00000334490 PGPEP1LA6NFU8 196 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 CNTFRP26992 372 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 SYNJ2BPP57105 145 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 TMEM101Q96IK0 257 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.46
C9orf47-201ENST00000334490 CARHSP1Q9Y2V2 147 aaKnown RBP12.15□□□□□ -0.46
C9orf47-201ENST00000334490 SMIM6P0DI80 62 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 RPP25LQ8N5L8 163 aaKnown RBP12.15□□□□□ -0.46
C9orf47-201ENST00000334490 IMMP2LQ96T52 175 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.46
C9orf47-201ENST00000334490 FREM1Q5H8C1 2179 aa12.15□□□□□ -0.47
C9orf47-201ENST00000334490 A0A087X0M5 115 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 A0A1B0GX30 115 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 J3QLI3 93 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 GPR61Q9BZJ8 451 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 SOX21Q9Y651 276 aaPredicted RBP12.14□□□□□ -0.47
C9orf47-201ENST00000334490 MMP23AO75900 390 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 FOLR2P14207 255 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 IGKV2-40A0A087WW87 121 aaPredicted RBP12.14□□□□□ -0.47
C9orf47-201ENST00000334490 G3V318 75 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 IGKV2D-40P01614 121 aaPredicted RBP12.14□□□□□ -0.47
C9orf47-201ENST00000334490 RNF151Q2KHN1 245 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 KAAG1Q9UBP8 84 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 DOCK11Q5JSL3 2073 aa12.14□□□□□ -0.47
C9orf47-201ENST00000334490 C7orf71A4D174 169 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 ADORA2A-AS1P86434 159 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 OCC1Q8TAD7 63 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 SRSF8Q9BRL6 282 aaKnown RBP12.13□□□□□ -0.47
C9orf47-201ENST00000334490 NAV2Q8IVL1 2488 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 A0A1B0GW15 77 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 C12orf54Q6X4T0 127 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 C9orf139Q6ZV77 190 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 GTF2H5Q6ZYL4 71 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 TMEM183AQ8IXX5 376 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 FCN3O75636 299 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 IL17RELQ6ZVW7 336 aa12.13□□□□□ -0.47
C9orf47-201ENST00000334490 IZUMO1RA6ND01 250 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 GCSHP23434 173 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 PMCHL1Q16048 86 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 ORMDL3Q8N138 153 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 OR4C5Q8NGB2 326 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 A8MXK9 166 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 C22orf46C9J442 243 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 APOHP02749 345 aaPredicted RBP12.12□□□□□ -0.47
C9orf47-201ENST00000334490 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
C9orf47-201ENST00000334490 MEIG1Q5JSS6 88 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 TMEM70Q9BUB7 260 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 DAZ1Q9NQZ3 744 aaKnown RBP12.12□□□□□ -0.47
C9orf47-201ENST00000334490 ZMAT5Q9UDW3 170 aaKnown RBP12.12□□□□□ -0.47
C9orf47-201ENST00000334490 TRGV11A0A075B6L2 103 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 ACTL10Q5JWF8 245 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
C9orf47-201ENST00000334490 RFNGQ9Y644 331 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 IGLV3-1P01715 115 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 ZNF833PQ6ZTB9 187 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 LINC00311Q8N616 119 aa12.12□□□□□ -0.47
C9orf47-201ENST00000334490 OR11H12B2RN74 326 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 RPL35AP18077 110 aaKnown RBP12.11□□□□□ -0.47
C9orf47-201ENST00000334490 AGMATQ9BSE5 352 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 A6NDN8 102 aa12.11□□□□□ -0.47
C9orf47-201ENST00000334490 E9PQ18 207 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms