RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 MST1LQ2TV78 715 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 C20orf144Q9BQM9 153 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 LINC01549A6NIU2 74 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 IGKV1-5P01602 117 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 WNT2P09544 360 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 PRB2P02812 416 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-201ENST00000327367 GAS1P54826 345 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 C1orf159Q96HA4 380 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 ZNF831Q5JPB2 1677 aa13.53□□□□□ -0.24
SMAD3-201ENST00000327367 TMEM213A2RRL7 107 aa13.52□□□□□ -0.24
SMAD3-201ENST00000327367 RCHY1Q96PM5 261 aa13.52□□□□□ -0.24
SMAD3-201ENST00000327367 TDRD6O60522 2096 aaKnown RBP13.52□□□□□ -0.24
SMAD3-201ENST00000327367 LINC00271P0C7V0 271 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 MLANAQ16655 118 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 LOC102723996A0A087X1L8 192 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 PMVKQ15126 192 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 C1orf43Q9BWL3 253 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 IGLC2P0DOY2 106 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 IGLC3P0DOY3 106 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 AMTNQ6UX39 209 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 ZNF329Q86UD4 541 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 MPDZO75970 2070 aa13.52□□□□□ -0.25
SMAD3-201ENST00000327367 SLC25A16P16260 332 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 PPDPFLQ8WWR9 84 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 RASL10AQ92737 203 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 TUBGCP6Q96RT7 1819 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 TRGV11A0A075B6L2 103 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 IGKV1-27A0A075B6S5 117 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 ARMS2P0C7Q2 107 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 TIMM23O14925 209 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 WIPF3A6NGB9 483 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 LYPD3O95274 346 aa13.51□□□□□ -0.25
SMAD3-201ENST00000327367 LHFPL1Q86WI0 220 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 SLAQ13239 276 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 NCOR1P1Q9H4R4 102 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 TP53BP1Q12888 1972 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-201ENST00000327367 IGLL1P15814 213 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 PRIMA1Q86XR5 153 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 LTBRP36941 435 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 A0A1W2PPM0 123 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 HAMPP81172 84 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 FDCSPQ8NFU4 85 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 C18orf32Q8TCD1 76 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 CYYR1Q96J86 154 aa13.5□□□□□ -0.25
SMAD3-201ENST00000327367 BVES-AS1Q5T3Y7 98 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 SCN4AP35499 1836 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 SRRM4A7MD48 611 aaKnown RBP13.49□□□□□ -0.25
SMAD3-201ENST00000327367 STPG1Q5TH74 334 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 F5P12259 2224 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 A0A0G2JRQ6 117 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 C5orf63A6NC05 138 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 PAX8Q06710 450 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 C6orf226Q5I0X4 101 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 C8orf49Q96NF6 230 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 TMEM133Q9H2Q1 129 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 A0A1W2PR77 199 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 ZIC4Q8N9L1 334 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 F8W1H4 67 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 NMSQ5H8A3 153 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 SPSB3Q6PJ21 355 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 ANAPC10Q9UM13 185 aa13.49□□□□□ -0.25
SMAD3-201ENST00000327367 SOCS3O14543 225 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 FGF6P10767 208 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 SMIM20Q8N5G0 67 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 VGLL1Q99990 258 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 CEACAM8P31997 349 aaPredicted RBP13.48□□□□□ -0.25
SMAD3-201ENST00000327367 MYMXA0A1B0GTQ4 84 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 IFI6P09912 130 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 RPL32P62910 135 aaKnown RBP13.48□□□□□ -0.25
SMAD3-201ENST00000327367 PPP1R32Q7Z5V6 425 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 DNAJC30Q96LL9 226 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 VCYO14598 125 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 LINC00477Q96M19 166 aa13.48□□□□□ -0.25
SMAD3-201ENST00000327367 TRAV26-2A0A0B4J265 109 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 C1QTNF4Q9BXJ3 329 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 C7orf69Q9H7B7 122 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 PEMTQ9UBM1 199 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 TRGV1A0A0A0MS02 117 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 TINCRA0A1B0GVN0 87 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 C5orf47Q569G3 176 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 SMRP1Q8NCR6 262 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 CABIN1Q9Y6J0 2220 aa13.47□□□□□ -0.25
SMAD3-201ENST00000327367 OVOL1O14753 267 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 Q0VG73 95 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 IGHV1-24A0A0C4DH33 117 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 FCN3O75636 299 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 FOXF2Q12947 444 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 METRNQ9UJH8 293 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 J3QW42 95 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 DUSP14O95147 198 aaKnown RBP13.46□□□□□ -0.25
SMAD3-201ENST00000327367 TMEM219Q86XT9 240 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 SAP25Q8TEE9 199 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 FBLN5Q9UBX5 448 aa13.46□□□□□ -0.25
SMAD3-201ENST00000327367 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.26
SMAD3-201ENST00000327367 TMEM14EPQ6UXP3 125 aa13.46□□□□□ -0.26
SMAD3-201ENST00000327367 PRR19A6NJB7 356 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 CCL25O15444 150 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 RBM3P98179 157 aaKnown RBP13.45□□□□□ -0.26
SMAD3-201ENST00000327367 LINC01559Q495D7 138 aa13.45□□□□□ -0.26
SMAD3-201ENST00000327367 QSER1Q2KHR3 1735 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms