RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 TRIM63Q969Q1 353 aa12.73□□□□□ -0.37
PTPMT1-201ENST00000326656 DNAH6Q9C0G6 4158 aa12.73□□□□□ -0.37
PTPMT1-201ENST00000326656 PCLOQ9Y6V0 5065 aa12.73□□□□□ -0.37
PTPMT1-201ENST00000326656 SOCS3O14543 225 aa12.72□□□□□ -0.37
PTPMT1-201ENST00000326656 SPART-AS1P0CW21 52 aa12.72□□□□□ -0.37
PTPMT1-201ENST00000326656 PYDC2Q56P42 97 aa12.72□□□□□ -0.37
PTPMT1-201ENST00000326656 LINC00052Q96N35 136 aa12.72□□□□□ -0.37
PTPMT1-201ENST00000326656 WDR12Q9GZL7 423 aaKnown RBP12.72□□□□□ -0.37
PTPMT1-201ENST00000326656 TEX48A0A1B0GUV7 120 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 VAMP1P23763 118 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 PAX9P55771 341 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 LYZP61626 148 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 EBLN2Q6P2I7 272 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 OR4D5Q8NGN0 318 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 COQ8AQ8NI60 647 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 PPP1R14BQ96C90 147 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 FAM210BQ96KR6 192 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 NDUFAF3Q9BU61 184 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 CELA1Q9UNI1 258 aa12.71□□□□□ -0.37
PTPMT1-201ENST00000326656 SYNGR2O43760 224 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 SFT2D2O95562 160 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 P0DMU3 169 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 FAM231AP0DMU4 169 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 FAM231CP0DMU5 169 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 S100A5P33763 92 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 UBE2MP61081 183 aaKnown RBP12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 ZNF79Q15937 498 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 GDF5OSQ5U4N7 250 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
PTPMT1-201ENST00000326656 IGKV1OR2-108A0A075B7D4 117 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 IAPPP10997 89 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 GALR1P47211 349 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 PSG9Q00887 426 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 OR2F1Q13607 317 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 LINC00336Q6ZUF6 198 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 GPR82Q96P67 336 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 RPRMQ9NS64 109 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 V9GYH0 126 aa12.69□□□□□ -0.38
PTPMT1-201ENST00000326656 HECTD4Q9Y4D8 3996 aa12.68□□□□□ -0.38
PTPMT1-201ENST00000326656 PRSS46E5RG02 174 aa12.68□□□□□ -0.38
PTPMT1-201ENST00000326656 POM121L12Q8N7R1 296 aa12.68□□□□□ -0.38
PTPMT1-201ENST00000326656 ZNF709Q8N972 641 aa12.68□□□□□ -0.38
PTPMT1-201ENST00000326656 BPIFCQ8NFQ6 507 aa12.68□□□□□ -0.38
PTPMT1-201ENST00000326656 OR1B1Q8NGR6 318 aa12.68□□□□□ -0.38
PTPMT1-201ENST00000326656 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
PTPMT1-201ENST00000326656 GOLT1BQ9Y3E0 138 aa12.68□□□□□ -0.38
PTPMT1-201ENST00000326656 A0A0J9YX75 114 aa12.67□□□□□ -0.38
PTPMT1-201ENST00000326656 IGKV3-20P01619 116 aa12.67□□□□□ -0.38
PTPMT1-201ENST00000326656 PPP1R1AQ13522 171 aa12.67□□□□□ -0.38
PTPMT1-201ENST00000326656 OXA1LQ15070 435 aa12.67□□□□□ -0.38
PTPMT1-201ENST00000326656 OR4B1Q8NGF8 309 aa12.67□□□□□ -0.38
PTPMT1-201ENST00000326656 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 A8MTW9 85 aa12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 WRBO00258 174 aa12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 FAM78BQ5VT40 261 aa12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 ZNF767PQ75MW2 155 aa12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 CCDC190Q86UF4 302 aa12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 DKK2Q9UBU2 259 aa12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 STRAPQ9Y3F4 350 aaKnown RBP12.66□□□□□ -0.38
PTPMT1-201ENST00000326656 HOXB5P09067 269 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 DEFB1P60022 68 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 ID3Q02535 119 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 SPANXN5Q5MJ07 72 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 TMEM144Q7Z5S9 345 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 RSG1Q9BU20 258 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 TMEM147Q9BVK8 224 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 MAGT1Q9H0U3 335 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 SLC35B3Q9H1N7 401 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 DOK5Q9P104 306 aa12.65□□□□□ -0.38
PTPMT1-201ENST00000326656 IGHV3OR16-12A0A075B7B8 117 aa12.64□□□□□ -0.39
PTPMT1-201ENST00000326656 NAP1L6A6NFF2 107 aa12.64□□□□□ -0.39
PTPMT1-201ENST00000326656 HBE1P02100 147 aa12.64□□□□□ -0.39
PTPMT1-201ENST00000326656 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
PTPMT1-201ENST00000326656 NIPSNAP3BQ9BS92 247 aa12.64□□□□□ -0.39
PTPMT1-201ENST00000326656 SLC25A32Q9H2D1 315 aa12.64□□□□□ -0.39
PTPMT1-201ENST00000326656 DUSP14O95147 198 aaKnown RBP12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 ORM2P19652 201 aa12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 EMP1P54849 157 aa12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 FXYD7P58549 80 aa12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 S100A7AQ86SG5 101 aa12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 C7orf50Q9BRJ6 194 aaKnown RBP12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 SLC25A22Q9H936 323 aa12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 KIAA1109Q2LD37 5005 aa12.63□□□□□ -0.39
PTPMT1-201ENST00000326656 C9orf170A2RU37 121 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 F6UB75 175 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 ZNF701M0R085 212 aaPredicted RBP12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 B2MP61769 119 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 SELENOTP62341 195 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 RRN3P1Q2M238 152 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 FAM222AQ5U5X8 452 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 IGF2BP2-AS1Q96M15 143 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 C17orf77Q96MU5 243 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 RNF24Q9Y225 148 aa12.62□□□□□ -0.39
PTPMT1-201ENST00000326656 CCDC160A6NGH7 325 aa12.61□□□□□ -0.39
PTPMT1-201ENST00000326656 IFNA21P01568 189 aa12.61□□□□□ -0.39
PTPMT1-201ENST00000326656 PLP1P60201 277 aa12.61□□□□□ -0.39
PTPMT1-201ENST00000326656 LGALS9BQ3B8N2 356 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms