RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 FAM120AOSQ5T036 256 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 FAM162BQ5T6X4 162 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 TCF24Q7RTU0 167 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 STPG4Q8N801 248 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 TXN2Q99757 166 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 Q9H3A6 140 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 F11RQ9Y624 299 aaKnown RBP6.94□□□□□ -1.3
CLK1-201ENST00000321356 CRXO43186 299 aaPredicted RBP6.94□□□□□ -1.3
CLK1-201ENST00000321356 ENSAO43768 121 aaKnown RBP6.94□□□□□ -1.3
CLK1-201ENST00000321356 NDUFB8O95169 186 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 P01737 135 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 CNTFRP26992 372 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 TSPOP30536 169 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 MAJINQ3KP22 176 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
CLK1-201ENST00000321356 C16orf54Q6UWD8 224 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 RBPMS2Q6ZRY4 209 aaKnown RBP6.94□□□□□ -1.3
CLK1-201ENST00000321356 LHFPL4Q7Z7J7 247 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 Q86TA4 180 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 ZGRF1Q86YA3 2104 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 ATOH7Q8N100 152 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 PRSS33Q8NF86 280 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 TMEM190Q8WZ59 177 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 SGK494Q96LW2 274 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 OTORQ9NRC9 128 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 TMEM14CQ9P0S9 112 aa6.94□□□□□ -1.3
CLK1-201ENST00000321356 ATMQ13315 3056 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 DMXL2Q8TDJ6 3036 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 IGHV2-26A0A0B4J1V2 119 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 TRBV6-1A0A0K0K1D8 114 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 VSTM5A8MXK1 200 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 SHISA9B4DS77 424 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 OVOL3O00110 214 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 IGLV2-11P01706 119 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 APOHP02749 345 aaPredicted RBP6.93□□□□□ -1.3
CLK1-201ENST00000321356 IGLC1P0CG04 106 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 Q56UQ5 140 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 LEMD1Q68G75 181 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 SPATA12Q7Z6I5 190 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 OR2D3Q8NGH3 330 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 CHCHD1Q96BP2 118 aaKnown RBP6.93□□□□□ -1.3
CLK1-201ENST00000321356 PPP1R14DQ9NXH3 145 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 RPH3ALQ9UNE2 315 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 HIGD1AQ9Y241 93 aa6.93□□□□□ -1.3
CLK1-201ENST00000321356 PCNX1Q96RV3 2341 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 IGHV1-3A0A0C4DH29 117 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 E7EQL1 145 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 I3L2K1 104 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 PSG1P11464 419 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 IGLL1P15814 213 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 RBPJQ06330 500 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 DMRTA1Q5VZB9 504 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 PPP1R27Q86WC6 154 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 KIR3DL3Q8N743 410 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 OR4F17Q8NGA8 305 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 ZNF835Q9Y2P0 537 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 PIEZO2Q9H5I5 2752 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 BSNQ9UPA5 3926 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 LOC102724200A0A096LPH7 203 aaPredicted RBP6.92□□□□□ -1.3
CLK1-201ENST00000321356 IGHV3-21A0A0B4J1V1 117 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 IGHV1-24A0A0C4DH33 117 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 IGHV1-69-2A0A0G2JMI3 117 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 ZNF785A8K8V0 405 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 BUB1B-PAK6H3BSN5 160 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 H3BTX0 84 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 RBP4P02753 201 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 APELAP0DMC3 54 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 FOXA3P55318 350 aaPredicted RBP6.92□□□□□ -1.3
CLK1-201ENST00000321356 PGLYRP4Q96LB8 373 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 NDFIP1Q9BT67 221 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 SLC25A39Q9BZJ4 359 aaPredicted RBP6.92□□□□□ -1.3
CLK1-201ENST00000321356 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
CLK1-201ENST00000321356 DYNLRB1Q9NP97 96 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 CLEC5AQ9NY25 188 aa6.92□□□□□ -1.3
CLK1-201ENST00000321356 RALYQ9UKM9 306 aaKnown RBP6.92□□□□□ -1.3
CLK1-201ENST00000321356 ZZEF1O43149 2961 aa6.91□□□□□ -1.3
CLK1-201ENST00000321356 ABCA1O95477 2261 aa6.91□□□□□ -1.3
CLK1-201ENST00000321356 SH2D7A6NKC9 451 aaPredicted RBP6.91□□□□□ -1.3
CLK1-201ENST00000321356 KLK10O43240 276 aa6.91□□□□□ -1.3
CLK1-201ENST00000321356 IGKV1-17P01599 117 aa6.91□□□□□ -1.3
CLK1-201ENST00000321356 CYB5R2Q6BCY4 276 aa6.91□□□□□ -1.3
CLK1-201ENST00000321356 Q8NA96 180 aa6.91□□□□□ -1.3
CLK1-201ENST00000321356 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
CLK1-201ENST00000321356 SRSF12Q8WXF0 261 aaKnown RBP6.91□□□□□ -1.3
CLK1-201ENST00000321356 DAZAP1Q96EP5 407 aaKnown RBP6.91□□□□□ -1.3
CLK1-201ENST00000321356 SRSF8Q9BRL6 282 aaKnown RBP6.91□□□□□ -1.3
CLK1-201ENST00000321356 INSIG2Q9Y5U4 225 aa6.91□□□□□ -1.3
CLK1-201ENST00000321356 TACC2O95359 2948 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 ACACAQ13085 2346 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 TRAV8-1A0A0A6YYK1 113 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 SYS1-DBNDD2H3BUS1 97 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 DLX1P56177 255 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 LYZP61626 148 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 MUC15Q8N387 334 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 GATD1Q8NB37 220 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 RNF5Q99942 180 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 FBXL15Q9H469 300 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 NGBQ9NPG2 151 aa6.9□□□□□ -1.3
CLK1-201ENST00000321356 TRBV19A0A075B6N1 114 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms