RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 K7EQG2 157 aa12.32□□□□□ -0.44
LRRC42-201ENST00000319223 AGPAT2O15120 278 aa12.32□□□□□ -0.44
LRRC42-201ENST00000319223 EWSR1Q01844 656 aaKnown RBP eCLIP12.32□□□□□ -0.44
LRRC42-201ENST00000319223 VWC2Q2TAL6 325 aa12.32□□□□□ -0.44
LRRC42-201ENST00000319223 OR1B1Q8NGR6 318 aa12.32□□□□□ -0.44
LRRC42-201ENST00000319223 DCANP1Q8TF63 244 aa12.32□□□□□ -0.44
LRRC42-201ENST00000319223 MED28Q9H204 178 aa12.32□□□□□ -0.44
LRRC42-201ENST00000319223 MAP6D1Q9H9H5 199 aa12.32□□□□□ -0.44
LRRC42-201ENST00000319223 CFDP00746 253 aaPredicted RBP12.31□□□□□ -0.44
LRRC42-201ENST00000319223 LINC00869P0C866 280 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
LRRC42-201ENST00000319223 S100A11P31949 105 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 SIGLEC15Q6ZMC9 328 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 STX12Q86Y82 276 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 UQCC1Q9NVA1 299 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 SLC45A2Q9UMX9 530 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 WDR83OSQ9Y284 106 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 PATE2Q6UY27 113 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 TMEM147Q9BVK8 224 aa12.31□□□□□ -0.44
LRRC42-201ENST00000319223 TRAV2A0A0B4J234 112 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 UBE2L5PA0A1B0GUS4 154 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 HELTA6NFD8 242 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 PLP1P60201 277 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 SELENOTP62341 195 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 PPP1R14BQ96C90 147 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 FAM110AQ9BQ89 295 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 TM2D3Q9BRN9 247 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 MBD2Q9UBB5 411 aa12.3□□□□□ -0.44
LRRC42-201ENST00000319223 ZNF98A6NK75 572 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 DEFB131AP59861 70 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 HBG1P69891 147 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 HBG2P69892 147 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 LEMD1Q68G75 181 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 OR5C1Q8NGR4 320 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 UHRF2Q96PU4 802 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 SLC25A31Q9H0C2 315 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 ARL6Q9H0F7 186 aa12.29□□□□□ -0.44
LRRC42-201ENST00000319223 HYPMO75409 117 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 ZNF688P0C7X2 276 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 AP2S1P53680 142 aaPredicted RBP12.28□□□□□ -0.44
LRRC42-201ENST00000319223 Q5BKY6 102 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 C1orf194Q5T5A4 169 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 SCRT1Q9BWW7 348 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 GGTLC1Q9BX51 225 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 SLC25A22Q9H936 323 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 H3BRN7 92 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 OR5G3P0C626 314 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 NUP62P37198 522 aaPredicted RBP12.28□□□□□ -0.44
LRRC42-201ENST00000319223 CAMLGP49069 296 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 ATP6V1FQ16864 119 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 MIC13Q5XKP0 118 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 ZNF546Q86UE3 836 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 OR8I2Q8N0Y5 310 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 SLC25A39Q9BZJ4 359 aaPredicted RBP12.28□□□□□ -0.44
LRRC42-201ENST00000319223 SLC25A32Q9H2D1 315 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 RETNQ9HD89 108 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 NRN1Q9NPD7 142 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 PFDN2Q9UHV9 154 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 U3KQK5 164 aa12.28□□□□□ -0.44
LRRC42-201ENST00000319223 LOC102724200A0A096LPH7 203 aaPredicted RBP12.27□□□□□ -0.45
LRRC42-201ENST00000319223 LYL1P12980 280 aa12.27□□□□□ -0.45
LRRC42-201ENST00000319223 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
LRRC42-201ENST00000319223 BAXQ07812 192 aa12.27□□□□□ -0.45
LRRC42-201ENST00000319223 CLINT1Q14677 625 aa12.27□□□□□ -0.45
LRRC42-201ENST00000319223 HIGD1AQ9Y241 93 aa12.27□□□□□ -0.45
LRRC42-201ENST00000319223 HUWE1Q7Z6Z7 4374 aaKnown RBP12.27□□□□□ -0.45
LRRC42-201ENST00000319223 PET100P0DJ07 73 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 FGF7P21781 194 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 RPL12P30050 165 aaKnown RBP12.26□□□□□ -0.45
LRRC42-201ENST00000319223 CMC4P56277 68 aaPredicted RBP12.26□□□□□ -0.45
LRRC42-201ENST00000319223 PRR20EP86478 221 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 PRR20CP86479 221 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 PRR20DP86480 221 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 PRR20BP86481 221 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 PRR20AP86496 221 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 THAP6Q8TBB0 222 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 TMEM37Q8WXS4 190 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 SHANK2-AS3Q9BTD1 123 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 ARV1Q9H2C2 271 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 TENM3Q9P273 2699 aa12.26□□□□□ -0.45
LRRC42-201ENST00000319223 RAP2BP61225 183 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 RCHY1Q96PM5 261 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 FBXL17Q9UF56 701 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 HSPB11Q9Y547 144 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 NBEAL2Q6ZNJ1 2754 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 OPCMLQ14982 345 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 MORN5Q5VZ52 161 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 SMIM3Q9BZL3 60 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 ZMAT4Q9H898 229 aa12.25□□□□□ -0.45
LRRC42-201ENST00000319223 KNCNA6PVL3 124 aa12.24□□□□□ -0.45
LRRC42-201ENST00000319223 SOCS3O14543 225 aa12.24□□□□□ -0.45
LRRC42-201ENST00000319223 RAB31Q13636 194 aa12.24□□□□□ -0.45
LRRC42-201ENST00000319223 PSMG4Q5JS54 123 aa12.24□□□□□ -0.45
LRRC42-201ENST00000319223 RSG1Q9BU20 258 aa12.24□□□□□ -0.45
LRRC42-201ENST00000319223 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
LRRC42-201ENST00000319223 RPL29P47914 159 aaKnown RBP12.23□□□□□ -0.45
LRRC42-201ENST00000319223 DEFB1P60022 68 aa12.23□□□□□ -0.45
LRRC42-201ENST00000319223 CHAC2Q8WUX2 184 aa12.23□□□□□ -0.45
LRRC42-201ENST00000319223 NPCDR1Q9BY65 106 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms