RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 L7N2F9 121 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 VAMP2P63027 116 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 BPIFCQ8NFQ6 507 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 OR1B1Q8NGR6 318 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 OR11H2Q8NH07 326 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 ZNF431Q8TF32 576 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-201ENST00000318787 LINC00052Q96N35 136 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 DOK5Q9P104 306 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 RCL1Q9Y2P8 373 aaKnown RBP11.79□□□□□ -0.52
HDDC2-201ENST00000318787 RYR2Q92736 4967 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 EWSR1Q01844 656 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDDC2-201ENST00000318787 C12orf45Q8N5I9 185 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-201ENST00000318787 ENKURQ8TC29 256 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 SMIM8Q96KF7 97 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 RAB40CQ96S21 281 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 WDR12Q9GZL7 423 aaKnown RBP11.79□□□□□ -0.52
HDDC2-201ENST00000318787 MGAT4CQ9UBM8 478 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 FBXL17Q9UF56 701 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 TBC1D24Q9ULP9 559 aa11.79□□□□□ -0.52
HDDC2-201ENST00000318787 CSMD3Q7Z407 3707 aa11.78□□□□□ -0.52
HDDC2-201ENST00000318787 A6NHS1 94 aa11.78□□□□□ -0.52
HDDC2-201ENST00000318787 MBPP02686 304 aaPredicted RBP11.78□□□□□ -0.52
HDDC2-201ENST00000318787 IL5P05113 134 aa11.78□□□□□ -0.52
HDDC2-201ENST00000318787 BCAP31P51572 246 aa11.78□□□□□ -0.52
HDDC2-201ENST00000318787 TRPT1Q86TN4 253 aaKnown RBP11.78□□□□□ -0.52
HDDC2-201ENST00000318787 OR10P1Q8NGE3 313 aa11.78□□□□□ -0.52
HDDC2-201ENST00000318787 GATAD1Q8WUU5 269 aa11.78□□□□□ -0.52
HDDC2-201ENST00000318787 TMEM147Q9BVK8 224 aa11.78□□□□□ -0.52
HDDC2-201ENST00000318787 DEFB4AO15263 64 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 CFDP00746 253 aaPredicted RBP11.77□□□□□ -0.53
HDDC2-201ENST00000318787 IGKV3-20P01619 116 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 PAX9P55771 341 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 S100A10P60903 97 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 TMEM182Q6ZP80 229 aaPredicted RBP11.77□□□□□ -0.53
HDDC2-201ENST00000318787 LINC00299Q6ZSB3 139 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 CYP2G1PQ6ZSU1 146 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 TMEM217Q8N7C4 229 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 CLEC5AQ9NY25 188 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 PTTG2Q9NZH5 202 aa11.77□□□□□ -0.53
HDDC2-201ENST00000318787 OR5G3P0C626 314 aa11.76□□□□□ -0.53
HDDC2-201ENST00000318787 SPP1P10451 314 aa11.76□□□□□ -0.53
HDDC2-201ENST00000318787 C4BPBP20851 252 aa11.76□□□□□ -0.53
HDDC2-201ENST00000318787 ID1P41134 155 aa11.76□□□□□ -0.53
HDDC2-201ENST00000318787 DEFB1P60022 68 aa11.76□□□□□ -0.53
HDDC2-201ENST00000318787 LCE6AA0A183 80 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 C7orf66A4D0T2 115 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 PMS2P5A8MQ11 134 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 TSC22D2O75157 780 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 UPK1BO75841 260 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 LINC00869P0C866 280 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 GALR1P47211 349 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 CAV2P51636 162 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 RAP2BP61225 183 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 DLK1P80370 383 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 FGL1Q08830 312 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 ASAH1Q13510 395 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 C1orf194Q5T5A4 169 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 MORN3Q6PF18 240 aaPredicted RBP11.75□□□□□ -0.53
HDDC2-201ENST00000318787 TMEM14EPQ6UXP3 125 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 SLC25A32Q9H2D1 315 aa11.75□□□□□ -0.53
HDDC2-201ENST00000318787 ZNF98A6NK75 572 aa11.74□□□□□ -0.53
HDDC2-201ENST00000318787 K7EPK0 472 aa11.74□□□□□ -0.53
HDDC2-201ENST00000318787 JTBO76095 146 aa11.74□□□□□ -0.53
HDDC2-201ENST00000318787 SLC38A11Q08AI6 406 aa11.74□□□□□ -0.53
HDDC2-201ENST00000318787 C2orf50Q96LR7 162 aa11.74□□□□□ -0.53
HDDC2-201ENST00000318787 SCRT1Q9BWW7 348 aa11.74□□□□□ -0.53
HDDC2-201ENST00000318787 NPVFQ9HCQ7 196 aa11.74□□□□□ -0.53
HDDC2-201ENST00000318787 S100A7P31151 101 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 FXYD7P58549 80 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 TAS2R30P59541 319 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 TEPPQ6URK8 271 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 OR4B1Q8NGF8 309 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 C16orf92Q96LL3 132 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 RSG1Q9BU20 258 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 GPN1Q9HCN4 374 aaPredicted RBP11.73□□□□□ -0.53
HDDC2-201ENST00000318787 XCL2Q9UBD3 114 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 HIGD1AQ9Y241 93 aa11.73□□□□□ -0.53
HDDC2-201ENST00000318787 LYSTQ99698 3801 aa11.72□□□□□ -0.53
HDDC2-201ENST00000318787 GOSR2O14653 212 aa11.72□□□□□ -0.53
HDDC2-201ENST00000318787 CST7O76096 145 aa11.72□□□□□ -0.53
HDDC2-201ENST00000318787 PVALBP20472 110 aaPredicted RBP11.72□□□□□ -0.53
HDDC2-201ENST00000318787 PSMB3P49720 205 aa11.72□□□□□ -0.53
HDDC2-201ENST00000318787 NUTF2P61970 127 aaKnown RBP11.72□□□□□ -0.53
HDDC2-201ENST00000318787 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
HDDC2-201ENST00000318787 UHRF2Q96PU4 802 aa11.72□□□□□ -0.53
HDDC2-201ENST00000318787 ARL6Q9H0F7 186 aa11.72□□□□□ -0.53
HDDC2-201ENST00000318787 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
HDDC2-201ENST00000318787 FAM24AA6NFZ4 105 aa11.71□□□□□ -0.53
HDDC2-201ENST00000318787 H3BMM0 161 aa11.71□□□□□ -0.53
HDDC2-201ENST00000318787 HYPMO75409 117 aa11.71□□□□□ -0.53
HDDC2-201ENST00000318787 GIG44P09565 113 aaPredicted RBP11.71□□□□□ -0.53
HDDC2-201ENST00000318787 ATF4P18848 351 aaPredicted RBP11.71□□□□□ -0.53
HDDC2-201ENST00000318787 NANOS2P60321 138 aaKnown RBP11.71□□□□□ -0.53
HDDC2-201ENST00000318787 RAB32Q13637 225 aa11.71□□□□□ -0.53
HDDC2-201ENST00000318787 TMEM41BQ5BJD5 291 aa11.71□□□□□ -0.53
HDDC2-201ENST00000318787 SLC25A39Q9BZJ4 359 aaPredicted RBP11.71□□□□□ -0.53
HDDC2-201ENST00000318787 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms