RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 TANC2Q9HCD6 1990 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 LRRK2Q5S007 2527 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 IGHV2-70DA0A0C4DH43 119 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 A0A1B0GXF2 115 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 RNASE2P10153 161 aaKnown RBP12.74□□□□□ -0.37
USH1C-202ENST00000318024 DLX1P56177 255 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 ATP5IP56385 69 aaPredicted RBP12.74□□□□□ -0.37
USH1C-202ENST00000318024 PRB3Q04118 309 aaPredicted RBP12.74□□□□□ -0.37
USH1C-202ENST00000318024 ZNF841Q6ZN19 808 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 KIR3DL3Q8N743 410 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 NHLRC2Q8NBF2 726 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 NUDT10Q8NFP7 164 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 NUDT11Q96G61 164 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 GRAMD2BQ96HH9 432 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 PLEKHA3Q9HB20 300 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 MALRD1Q5VYJ5 2156 aa12.74□□□□□ -0.37
USH1C-202ENST00000318024 TRAV5A0A0B4J249 113 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 SRRM4A7MD48 611 aaKnown RBP12.73□□□□□ -0.37
USH1C-202ENST00000318024 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
USH1C-202ENST00000318024 OR1L8Q8NGR8 309 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 C1RLQ9NZP8 487 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 TEX50A0A1B0GTY4 177 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 FSTL3O95633 263 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 CDKN1BP46527 198 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 MFAP2P55001 183 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 UBE2G1P62253 170 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 RPL8P62917 257 aaKnown RBP12.73□□□□□ -0.37
USH1C-202ENST00000318024 CD69Q07108 199 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 ADTRPQ96IZ2 230 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 RAB9BQ9NP90 201 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 ZNF355PQ9NSJ1 428 aa12.73□□□□□ -0.37
USH1C-202ENST00000318024 RPUSD1Q9UJJ7 312 aaKnown RBP12.73□□□□□ -0.37
USH1C-202ENST00000318024 CRXO43186 299 aaPredicted RBP12.72□□□□□ -0.37
USH1C-202ENST00000318024 HSBP1O75506 76 aa12.72□□□□□ -0.37
USH1C-202ENST00000318024 OR2D3Q8NGH3 330 aa12.72□□□□□ -0.37
USH1C-202ENST00000318024 C22orf15Q8WYQ4 148 aa12.72□□□□□ -0.37
USH1C-202ENST00000318024 TIMD4Q96H15 378 aa12.72□□□□□ -0.37
USH1C-202ENST00000318024 HINT2Q9BX68 163 aa12.72□□□□□ -0.37
USH1C-202ENST00000318024 LINC00574Q9H8X3 128 aa12.72□□□□□ -0.37
USH1C-202ENST00000318024 M0R2Z0 102 aa12.72□□□□□ -0.37
USH1C-202ENST00000318024 Q56UQ5 140 aa12.72□□□□□ -0.37
USH1C-202ENST00000318024 SPG11Q96JI7 2443 aa12.71□□□□□ -0.37
USH1C-202ENST00000318024 HSBP1L1C9JCN9 74 aa12.71□□□□□ -0.37
USH1C-202ENST00000318024 MYCNOSP40205 109 aa12.71□□□□□ -0.37
USH1C-202ENST00000318024 ZNF329Q86UD4 541 aa12.71□□□□□ -0.37
USH1C-202ENST00000318024 AMMECR1Q9Y4X0 333 aaPredicted RBP12.71□□□□□ -0.37
USH1C-202ENST00000318024 MAP1AP78559 2803 aaPredicted RBP12.71□□□□□ -0.38
USH1C-202ENST00000318024 IGKV1-16P04430 117 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 FBLN7Q53RD9 439 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 A0A1W2PN81 502 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 PEX7O00628 323 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 CT45A6P0DMU7 189 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 CT45A5P0DMU8 189 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 CT45A7P0DMV0 189 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 GPR6P46095 362 aaPredicted RBP12.7□□□□□ -0.38
USH1C-202ENST00000318024 UBE2L3P68036 154 aaKnown RBP12.7□□□□□ -0.38
USH1C-202ENST00000318024 PATE2Q6UY27 113 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 ATP5L2Q7Z4Y8 100 aa12.7□□□□□ -0.38
USH1C-202ENST00000318024 RHOGP84095 191 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 TMEM155Q4W5P6 130 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 ZNF596Q8TC21 504 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 CACNG8Q8WXS5 425 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 SSBP4Q9BWG4 385 aaPredicted RBP12.69□□□□□ -0.38
USH1C-202ENST00000318024 CELSR2Q9HCU4 2923 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 MED13LQ71F56 2210 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 CENPEQ02224 2701 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 HIGD1CA8MV81 97 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 CORTO00230 105 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 PYYP10082 97 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 EFNA4P52798 201 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 DLX6P56179 175 aa12.69□□□□□ -0.38
USH1C-202ENST00000318024 SSBP2P81877 361 aaPredicted RBP12.69□□□□□ -0.38
USH1C-202ENST00000318024 ARHGAP32A7KAX9 2087 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 PPIAL4CA0A0B4J2A2 164 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 INS-IGF2F8WCM5 200 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 PPIAL4GP0DN37 164 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 CFAP161Q6P656 301 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 SLC25A48Q6ZT89 311 aaKnown RBP12.68□□□□□ -0.38
USH1C-202ENST00000318024 OR10W1Q8NGF6 305 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 NRGNQ92686 78 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 FXYD5Q96DB9 178 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 CLEC5AQ9NY25 188 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
USH1C-202ENST00000318024 OR2T6Q8NHC8 308 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 TMEM70Q9BUB7 260 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 NDUFA4L2Q9NRX3 87 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 TP73-AS1Q9UF72 201 aa12.68□□□□□ -0.38
USH1C-202ENST00000318024 IGKV1D-37A0A075B6S9 117 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 TRAV30A0A087WSZ9 112 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 C22orf46C9J442 243 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 OVOL3O00110 214 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 SAA1P0DJI8 122 aaPredicted RBP12.67□□□□□ -0.38
USH1C-202ENST00000318024 IGHV1-8P0DP01 117 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 REG1BP48304 166 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 CHRDL1Q9BU40 450 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 MLST8Q9BVC4 326 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
USH1C-202ENST00000318024 SH2D7A6NKC9 451 aaPredicted RBP12.66□□□□□ -0.38
USH1C-202ENST00000318024 COL8A1P27658 744 aa12.66□□□□□ -0.38
USH1C-202ENST00000318024 DIAPH2-AS1Q14236 149 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms