RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 UBR5O95071 2799 aaPredicted RBP6.09□□□□□ -1.44
TRIM55-202ENST00000315962 TEX15Q9BXT5 2789 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 LOC102724200A0A096LPH7 203 aaPredicted RBP6.09□□□□□ -1.44
TRIM55-202ENST00000315962 HELTA6NFD8 242 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 CGB1A6NKQ9 187 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 IGLV1-47P01700 117 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 IGLV2-23P01705 113 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 LIPFP07098 398 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 C3orf79P0CE67 100 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 OPRK1P41145 380 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 YPEL3P61236 119 aaPredicted RBP6.09□□□□□ -1.44
TRIM55-202ENST00000315962 Q8N976 141 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 ADTRPQ96IZ2 230 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 CHODLQ9H9P2 273 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF355PQ9NSJ1 428 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 CLEC5AQ9NY25 188 aa6.09□□□□□ -1.44
TRIM55-202ENST00000315962 MRPL36Q9P0J6 103 aaKnown RBP6.09□□□□□ -1.44
TRIM55-202ENST00000315962 FOXA2Q9Y261 457 aaPredicted RBP6.09□□□□□ -1.44
TRIM55-202ENST00000315962 A0A1W2PS18 150 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 NCBP2LA6PVI3 153 aaKnown RBP6.08□□□□□ -1.44
TRIM55-202ENST00000315962 CORTO00230 105 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 BMPR1BO00238 502 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 GPX1P07203 203 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 KIR2DS2P43631 304 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 PRRX1P54821 245 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 GNG5P63218 68 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 TEPPQ6URK8 271 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 PERPQ96FX8 193 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF586Q9NXT0 402 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 PRNDQ9UKY0 176 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 RNF24Q9Y225 148 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 SOX21Q9Y651 276 aaPredicted RBP6.08□□□□□ -1.44
TRIM55-202ENST00000315962 PRSS46E5RG02 174 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 NDUFB8O95169 186 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 OR5G3P0C626 314 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 LINC00614P0C842 121 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 FOXA3P55318 350 aaPredicted RBP6.08□□□□□ -1.44
TRIM55-202ENST00000315962 Q71RC1 249 aaPredicted RBP6.08□□□□□ -1.44
TRIM55-202ENST00000315962 VMO1Q7Z5L0 202 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF503Q96F45 646 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 FNDC4Q9H6D8 234 aaPredicted RBP6.08□□□□□ -1.44
TRIM55-202ENST00000315962 DOPEY2Q9Y3R5 2298 aa6.08□□□□□ -1.44
TRIM55-202ENST00000315962 HECTD1Q9ULT8 2610 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 A0A1W2PPI3 338 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 ITGB1BP1O14713 200 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 HYPMO75409 117 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 CNIH1O95406 144 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 HNRNPA3P51991 378 aaKnown RBP6.07□□□□□ -1.44
TRIM55-202ENST00000315962 RHOBP62745 196 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 PRCDQ00LT1 54 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 RNASEKQ6P5S7 137 aaKnown RBP6.07□□□□□ -1.44
TRIM55-202ENST00000315962 OR52E5Q8NH55 327 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 OSR1Q8TAX0 266 aaPredicted RBP6.07□□□□□ -1.44
TRIM55-202ENST00000315962 C22orf15Q8WYQ4 148 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 NPIPB3Q92617 1050 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 PMCHL2Q9BQD1 86 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 NPVFQ9HCQ7 196 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 CDC42EP3Q9UKI2 254 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 APCP25054 2843 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 IGHV4-39P01824 125 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 CD99P14209 185 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 RANP62826 216 aaKnown RBP6.07□□□□□ -1.44
TRIM55-202ENST00000315962 RNF151Q2KHN1 245 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 IBA57Q5T440 356 aaKnown RBP6.07□□□□□ -1.44
TRIM55-202ENST00000315962 TMEM136Q6ZRR5 245 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 RNASE8Q8TDE3 154 aaKnown RBP6.07□□□□□ -1.44
TRIM55-202ENST00000315962 C20orf144Q9BQM9 153 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 NDUFA4L2Q9NRX3 87 aa6.07□□□□□ -1.44
TRIM55-202ENST00000315962 MOSP00540 346 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 RNASE2P10153 161 aaKnown RBP6.06□□□□□ -1.44
TRIM55-202ENST00000315962 USF1P22415 310 aaPredicted RBP6.06□□□□□ -1.44
TRIM55-202ENST00000315962 HTR1DP28221 377 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 MFAP2P55001 183 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 SELENOTP62341 195 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 GAGE1Q13065 139 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 HIST2H2BCQ6DN03 193 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 BRD3OSQ6XYD6 125 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 SPATA12Q7Z6I5 190 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 NIT1Q86X76 327 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 ACANP16112 2415 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 NF1P21359 2839 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 FASNP49327 2511 aaKnown RBP6.06□□□□□ -1.44
TRIM55-202ENST00000315962 ITPR2Q14571 2701 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 IGHV3OR16-8A0A075B7F1 116 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 IGHV3-35A0A0C4DH35 117 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 NDUFS8O00217 210 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 IGHV3-23P01764 117 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 ZNF137PP52743 207 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 PAFAH1B2P68402 229 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 MRGPRG-AS1Q2M3A8 158 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 TIGITQ495A1 244 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 TMEM177Q53S58 311 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 GDF5OSQ5U4N7 250 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 LEMD1Q68G75 181 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 LINC00173Q6ZV60 143 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 DTX2Q86UW9 622 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 PPP1R27Q86WC6 154 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 PDPNQ86YL7 162 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 OR1L8Q8NGR8 309 aa6.06□□□□□ -1.44
TRIM55-202ENST00000315962 TSKUQ8WUA8 353 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms