RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FCN2Q15485 313 aa8.89□□□□□ -0.99
SCFD1-201ENST00000311943 CYP2G1PQ6ZSU1 146 aa8.89□□□□□ -0.99
SCFD1-201ENST00000311943 PPP1R1CQ8WVI7 109 aa8.89□□□□□ -0.99
SCFD1-201ENST00000311943 KMT2CQ8NEZ4 4911 aaKnown RBP8.89□□□□□ -0.99
SCFD1-201ENST00000311943 OR4C46A6NHA9 309 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 PRAF2O60831 178 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 TAS2R30P59541 319 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 GDF5OSQ5U4N7 250 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 LYRM2Q9NU23 88 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-201ENST00000311943 CSMD3Q7Z407 3707 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 AGPAT2O15120 278 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 LINC00869P0C866 280 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 DLK1P80370 383 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 THAP6Q8TBB0 222 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 SLC25A32Q9H2D1 315 aa8.88□□□□□ -0.99
SCFD1-201ENST00000311943 UBE2L5PA0A1B0GUS4 154 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 EIF3GO75821 320 aaKnown RBP eCLIP8.87□□□□□ -0.99
SCFD1-201ENST00000311943 EIF2B2P49770 351 aaKnown RBP8.87□□□□□ -0.99
SCFD1-201ENST00000311943 EWSR1Q01844 656 aaKnown RBP eCLIP8.87□□□□□ -0.99
SCFD1-201ENST00000311943 DEFB135Q30KP9 77 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 MIC13Q5XKP0 118 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 SIGLEC15Q6ZMC9 328 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 NPVFQ9HCQ7 196 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 STARD9Q9P2P6 4700 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 F6UB75 175 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 H3BTX0 84 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 PTTG1O95997 202 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 OR5G3P0C626 314 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 HLA-DMBP28068 263 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 CLINT1Q14677 625 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 GCSAMLQ5JQS6 135 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 PSMG4Q5JS54 123 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 TMEM37Q8WXS4 190 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 PPP1R14BQ96C90 147 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 SMIM3Q9BZL3 60 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 NMES1Q9C002 83 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 ARL6Q9H0F7 186 aa8.87□□□□□ -0.99
SCFD1-201ENST00000311943 LOC102724200A0A096LPH7 203 aaPredicted RBP8.86□□□□□ -0.99
SCFD1-201ENST00000311943 A0A1W2PS18 150 aa8.86□□□□□ -0.99
SCFD1-201ENST00000311943 ZNF98A6NK75 572 aa8.86□□□□□ -0.99
SCFD1-201ENST00000311943 C20orf173Q96LM9 149 aa8.86□□□□□ -0.99
SCFD1-201ENST00000311943 SLC45A2Q9UMX9 530 aa8.86□□□□□ -0.99
SCFD1-201ENST00000311943 TRAV5A0A0B4J249 113 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 MPC2O95563 127 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 IGKV3-20P01619 116 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 NHLRC4P0CG21 123 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-201ENST00000311943 SULT1A1P50225 295 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 DCTN2Q13561 401 aaKnown RBP8.85□□□□□ -0.99
SCFD1-201ENST00000311943 ACTL10Q5JWF8 245 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 OVOL2Q9BRP0 275 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 GGTLC1Q9BX51 225 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 SLC25A39Q9BZJ4 359 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-201ENST00000311943 MBD2Q9UBB5 411 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 SOCS3O14543 225 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 SCGB2A1O75556 95 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 GIG44P09565 113 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-201ENST00000311943 ZNF705DP0CH99 300 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-201ENST00000311943 ZNF705BP0CI00 300 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-201ENST00000311943 OR8I2Q8N0Y5 310 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 RNF182Q8N6D2 247 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 OR5C1Q8NGR4 320 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 CLEC5AQ9NY25 188 aa8.85□□□□□ -0.99
SCFD1-201ENST00000311943 PAFAH1B2P68402 229 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 FGL1Q08830 312 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 OXA1LQ15070 435 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 LINC00052Q96N35 136 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 RSG1Q9BU20 258 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 ARV1Q9H2C2 271 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 WFDC1Q9HC57 220 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 NRN1Q9NPD7 142 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 WDR83OSQ9Y284 106 aa8.84□□□□□ -0.99
SCFD1-201ENST00000311943 H3BRN7 92 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 PVALBP20472 110 aaPredicted RBP8.83□□□□□ -1
SCFD1-201ENST00000311943 C4BPBP20851 252 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 CAMLGP49069 296 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 FXYD7P58549 80 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 BAXQ07812 192 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 CHAC2Q8WUX2 184 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 GRAMD2BQ96HH9 432 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 NARS2Q96I59 477 aaKnown RBP8.83□□□□□ -1
SCFD1-201ENST00000311943 TMEM231Q9H6L2 316 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 ZMAT4Q9H898 229 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 UQCC1Q9NVA1 299 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 DNAH7Q8WXX0 4024 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 SMLR1H3BR10 107 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 DEFB4AO15263 64 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 RGS21Q2M5E4 152 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 VWC2Q2TAL6 325 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 SPATA25Q9BR10 227 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 TMEM147Q9BVK8 224 aa8.83□□□□□ -1
SCFD1-201ENST00000311943 TRAV8-2A0A0B4J237 113 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 HELTA6NFD8 242 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 E5RGE8 158 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 HYPMO75409 117 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 FGF7P21781 194 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 PRR20EP86478 221 aa8.82□□□□□ -1
SCFD1-201ENST00000311943 PRR20CP86479 221 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 437.1 ms