RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 FGL1Q08830 312 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 ATP6V1FQ16864 119 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 C16orf54Q6UWD8 224 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 RBPMS2Q6ZRY4 209 aaKnown RBP6.81□□□□□ -1.32
PDE4D-201ENST00000309641 GLMPQ8WWB7 406 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 ASB13Q8WXK3 278 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 ST6GAL2Q96JF0 529 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 AQP10Q96PS8 301 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 ARL6Q9H0F7 186 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 FBXL17Q9UF56 701 aa6.81□□□□□ -1.32
PDE4D-201ENST00000309641 TSPAN4O14817 238 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 FABP1P07148 127 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 AP2S1P53680 142 aaPredicted RBP6.8□□□□□ -1.32
PDE4D-201ENST00000309641 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
PDE4D-201ENST00000309641 PRR20EP86478 221 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 PRR20CP86479 221 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 PRR20DP86480 221 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 PRR20BP86481 221 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 PRR20AP86496 221 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 GCSAMLQ5JQS6 135 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 MORN5Q5VZ52 161 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 WFDC3Q8IUB2 231 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 FAM24BQ8N5W8 94 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 OR2K2Q8NGT1 345 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 TMEM37Q8WXS4 190 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 ATP5SQ99766 215 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 RSG1Q9BU20 258 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 SCRT1Q9BWW7 348 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 WDR61Q9GZS3 305 aaKnown RBP6.8□□□□□ -1.32
PDE4D-201ENST00000309641 TNFSF18Q9UNG2 199 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 NBEAL2Q6ZNJ1 2754 aa6.8□□□□□ -1.32
PDE4D-201ENST00000309641 ARPC5O15511 151 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 OR5G3P0C626 314 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 SELENOTP62341 195 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 OPCMLQ14982 345 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 MRAPQ8TCY5 172 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 NPCDR1Q9BY65 106 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 SLC25A22Q9H936 323 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 C19orf73Q9NVV2 129 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 TRAV25A0A0B4J276 109 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 A0A1W2PS18 150 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 ZNF98A6NK75 572 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 CD81P60033 236 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 PLP1P60201 277 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 ZNF124Q15973 351 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 DEFB121Q5J5C9 76 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 LAMTOR1Q6IAA8 161 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 PPP1R14BQ96C90 147 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 C17orf77Q96MU5 243 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 SPAG8Q99932 426 aaPredicted RBP6.79□□□□□ -1.32
PDE4D-201ENST00000309641 SLC25A39Q9BZJ4 359 aaPredicted RBP6.79□□□□□ -1.32
PDE4D-201ENST00000309641 ARV1Q9H2C2 271 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 MS4A6AQ9H2W1 248 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 SLC39A9Q9NUM3 307 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 UBQLN2Q9UHD9 624 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 PXMP4Q9Y6I8 212 aa6.79□□□□□ -1.32
PDE4D-201ENST00000309641 H3BRN7 92 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 HYPMO75409 117 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 CFDP00746 253 aaPredicted RBP6.78□□□□□ -1.32
PDE4D-201ENST00000309641 SNRPCP09234 159 aaKnown RBP6.78□□□□□ -1.32
PDE4D-201ENST00000309641 RPL29P47914 159 aaKnown RBP6.78□□□□□ -1.32
PDE4D-201ENST00000309641 B2MP61769 119 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 ODF3L2Q3SX64 289 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 DEFB125Q8N687 156 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 STXBP6Q8NFX7 210 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 NARS2Q96I59 477 aaKnown RBP6.78□□□□□ -1.32
PDE4D-201ENST00000309641 CITED4Q96RK1 184 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 NEURL2Q9BR09 285 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 SLC25A32Q9H2D1 315 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 ZMAT5Q9UDW3 170 aaKnown RBP6.78□□□□□ -1.32
PDE4D-201ENST00000309641 HIGD1AQ9Y241 93 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 SMAD5-AS1Q9Y6J3 95 aa6.78□□□□□ -1.32
PDE4D-201ENST00000309641 RAB31Q13636 194 aa6.77□□□□□ -1.32
PDE4D-201ENST00000309641 SIGLEC15Q6ZMC9 328 aa6.77□□□□□ -1.32
PDE4D-201ENST00000309641 GTSCR1Q86UQ5 136 aa6.77□□□□□ -1.32
PDE4D-201ENST00000309641 OR8I2Q8N0Y5 310 aa6.77□□□□□ -1.32
PDE4D-201ENST00000309641 INO80EQ8NBZ0 244 aaPredicted RBP6.77□□□□□ -1.32
PDE4D-201ENST00000309641 DCANP1Q8TF63 244 aa6.77□□□□□ -1.32
PDE4D-201ENST00000309641 SHANK2-AS3Q9BTD1 123 aa6.77□□□□□ -1.32
PDE4D-201ENST00000309641 TMEM231Q9H6L2 316 aa6.77□□□□□ -1.32
PDE4D-201ENST00000309641 TRAV5A0A0B4J249 113 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 COX7A2P2O60397 106 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 MPDU1O75352 247 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 EIF3GO75821 320 aaKnown RBP eCLIP6.77□□□□□ -1.33
PDE4D-201ENST00000309641 IGHV4-30-4P0DP06 118 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 BMI1P35226 326 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 SPATA31B1PQ5VZV4 182 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 LINC00305Q7Z4B0 112 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 APRG1Q8IVJ8 170 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 GRAMD2BQ96HH9 432 aa6.77□□□□□ -1.33
PDE4D-201ENST00000309641 OR11H12B2RN74 326 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 K7EQG2 157 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 DNASE2O00115 360 aaPredicted RBP6.76□□□□□ -1.33
PDE4D-201ENST00000309641 IFNA5P01569 189 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 CXCL2P19875 107 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 NUP62P37198 522 aaPredicted RBP6.76□□□□□ -1.33
PDE4D-201ENST00000309641 RPL7L1Q6DKI1 246 aaKnown RBP6.76□□□□□ -1.33
PDE4D-201ENST00000309641 Q6ZRG5 221 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 HSD17B11Q8NBQ5 300 aa6.76□□□□□ -1.33
PDE4D-201ENST00000309641 MFFQ9GZY8 342 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms