RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 PEX7O00628 323 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 AMBPP02760 352 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 FHITP49789 147 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 KCNS1Q96KK3 526 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 TEX48A0A1B0GUV7 120 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 FAM74A7A6NL05 159 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 AMTP48728 403 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 WFDC12Q8WWY7 111 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 TMEM190Q8WZ59 177 aa7.41□□□□□ -1.22
PTPRE-202ENST00000306042 KLK5Q9Y337 293 aaPredicted RBP7.41□□□□□ -1.22
PTPRE-202ENST00000306042 GCGP01275 180 aa7.4□□□□□ -1.22
PTPRE-202ENST00000306042 PYYP10082 97 aa7.4□□□□□ -1.22
PTPRE-202ENST00000306042 RNF212Q495C1 297 aa7.4□□□□□ -1.22
PTPRE-202ENST00000306042 Q6ZSR3 168 aa7.4□□□□□ -1.22
PTPRE-202ENST00000306042 C9orf139Q6ZV77 190 aa7.4□□□□□ -1.22
PTPRE-202ENST00000306042 SLC25A39Q9BZJ4 359 aaPredicted RBP7.4□□□□□ -1.22
PTPRE-202ENST00000306042 JMJD1CQ15652 2540 aa7.4□□□□□ -1.22
PTPRE-202ENST00000306042 ZNF98A6NK75 572 aa7.4□□□□□ -1.22
PTPRE-202ENST00000306042 RPL35P42766 123 aaKnown RBP7.4□□□□□ -1.22
PTPRE-202ENST00000306042 TMEM95Q3KNT9 176 aa7.4□□□□□ -1.22
PTPRE-202ENST00000306042 TMEM218A2RU14 115 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 CLPSL1A2RUU4 121 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 M0R381 172 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 CD7P09564 240 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 MUC21Q5SSG8 566 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 TPSG1Q9NRR2 321 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 NDUFA4L2Q9NRX3 87 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 PMS2P5A8MQ11 134 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 TOMM40O96008 361 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 BLCAPP62952 87 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 AWAT1Q58HT5 328 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 OR11H4Q8NGC9 324 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 TMEM18Q96B42 140 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 SCRT1Q9BWW7 348 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 TMEM14BQ9NUH8 114 aa7.4□□□□□ -1.23
PTPRE-202ENST00000306042 NPIPB5A8MRT5 1133 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 CIARTQ8N365 385 aaPredicted RBP7.39□□□□□ -1.23
PTPRE-202ENST00000306042 COL4A2P08572 1712 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 H3BUA1 57 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 PMCHP20382 165 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 TCTEX1D4Q5JR98 221 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 LY6G6FQ5SQ64 297 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 FMC1Q96HJ9 113 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 NEU1Q99519 415 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 SIRPDQ9H106 197 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 CCL24O00175 119 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 FCN3O75636 299 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 CENPWQ5EE01 88 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 Q6ZN92 141 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 IGFBPL1Q8WX77 278 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 TCEAL7Q9BRU2 100 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 RNF126Q9BV68 326 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 GGTLC1Q9BX51 225 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 A0A0G2JRQ6 117 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 H7C1H1 209 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 IER3P46695 156 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 DEFB131AP59861 70 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 PDZD11Q5EBL8 140 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 C11orf71Q6IPW1 123 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 C11orf42Q8N5U0 333 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 PGLYRP4Q96LB8 373 aa7.39□□□□□ -1.23
PTPRE-202ENST00000306042 TRAV21A0A0B4J279 112 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 TMEM262E9PQX1 116 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 LY6G6DO95868 133 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 FABP4P15090 132 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 CKS2P33552 79 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 TMEM14EPQ6UXP3 125 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 Q6ZRM9 215 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 BCL6BQ8N143 479 aaPredicted RBP7.38□□□□□ -1.23
PTPRE-202ENST00000306042 FAM24BQ8N5W8 94 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 MBD6Q96DN6 1003 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 ASCL2Q99929 193 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 Q8N7P7 452 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.38□□□□□ -1.23
PTPRE-202ENST00000306042 TMEM50AO95807 157 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 RPLP1P05386 114 aaKnown RBP7.38□□□□□ -1.23
PTPRE-202ENST00000306042 PRSS1P07477 247 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 MLANAQ16655 118 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 YTHDF2Q9Y5A9 579 aaKnown RBP7.38□□□□□ -1.23
PTPRE-202ENST00000306042 DNAJC9-AS1A6NH13 148 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 FABP5P3A8MUU1 101 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 H0YIZ8 118 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 FOXE3Q13461 319 aa7.38□□□□□ -1.23
PTPRE-202ENST00000306042 C15orf62A8K5M9 175 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 ZNF253O75346 499 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 INSL3P51460 131 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 PARLQ9H300 379 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 DYSFO75923 2080 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 TRGV11A0A075B6L2 103 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 TRAV5A0A0B4J249 113 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 TRGV4A0A0C4DH28 118 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 NDUFA4O00483 81 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 GCSAMLQ5JQS6 135 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 C8orf86Q6ZUL3 223 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 C1QL4Q86Z23 238 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 CLRN3Q8NCR9 226 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 TNFRSF18Q9Y5U5 241 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 RNF222A6NCQ9 220 aa7.37□□□□□ -1.23
PTPRE-202ENST00000306042 TMEM250H0YL14 139 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms