RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 TEX22C9J3V5 150 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 LYNX1G3V0Z9 82 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 LY6LH3BQJ8 138 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 LIPFP07098 398 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 NBEAP1P0C6P0 100 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 LYNX1P0DP58 116 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 TCL1AP56279 114 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 LINC00310P59036 64 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 USF2Q15853 346 aaPredicted RBP11.3□□□□□ -0.6
RAB40A-201ENST00000304236 C1orf194Q5T5A4 169 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 LY6G5BQ8NDX9 201 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 LINC00479Q96M42 142 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 RAB1BQ9H0U4 201 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 KLF12Q9Y4X4 402 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 SLC25A5P05141 298 aaKnown RBP11.3□□□□□ -0.6
RAB40A-201ENST00000304236 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 HIST1H1EP10412 219 aaKnown RBP11.3□□□□□ -0.6
RAB40A-201ENST00000304236 COX7A1P24310 79 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 BRS3P32247 399 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 DEFB113Q30KQ7 82 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
RAB40A-201ENST00000304236 ABCA4P78363 2273 aa11.29□□□□□ -0.6
RAB40A-201ENST00000304236 PGPA6NDG6 321 aa11.29□□□□□ -0.6
RAB40A-201ENST00000304236 C5orf17Q8NAS9 161 aa11.29□□□□□ -0.6
RAB40A-201ENST00000304236 NUDT10Q8NFP7 164 aa11.29□□□□□ -0.6
RAB40A-201ENST00000304236 SRSF12Q8WXF0 261 aaKnown RBP11.29□□□□□ -0.6
RAB40A-201ENST00000304236 NUDT11Q96G61 164 aa11.29□□□□□ -0.6
RAB40A-201ENST00000304236 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
RAB40A-201ENST00000304236 HIGD1AQ9Y241 93 aa11.29□□□□□ -0.6
RAB40A-201ENST00000304236 PLXNB1O43157 2135 aa11.29□□□□□ -0.6
RAB40A-201ENST00000304236 ZNF705FA8MVS1 300 aaPredicted RBP11.28□□□□□ -0.6
RAB40A-201ENST00000304236 SPINK4O60575 86 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 APCSP02743 223 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 ZNF705DP0CH99 300 aaPredicted RBP11.28□□□□□ -0.6
RAB40A-201ENST00000304236 ZNF705BP0CI00 300 aaPredicted RBP11.28□□□□□ -0.6
RAB40A-201ENST00000304236 FOSL1P15407 271 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 KRTAP21-3Q3LHN1 58 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 MRPL54Q6P161 138 aaKnown RBP11.28□□□□□ -0.6
RAB40A-201ENST00000304236 NHLRC2Q8NBF2 726 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 TIMD4Q96H15 378 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 GPR82Q96P67 336 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 RBM14Q96PK6 669 aaKnown RBP11.28□□□□□ -0.6
RAB40A-201ENST00000304236 GNB4Q9HAV0 340 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 MTORP42345 2549 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 ITPR3Q14573 2671 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 TRAV34A0A0B4J273 112 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 GP9P14770 177 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 PLGLAQ15195 96 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 TPTE2P1Q5T6R2 138 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 Q6ZWC4 215 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 LINC00469Q8N7U9 141 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 SIGLECL1Q8N7X8 197 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 TSKUQ8WUA8 353 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 BLNKQ8WV28 456 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 FMC1Q96HJ9 113 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 HSPB9Q9BQS6 159 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 ATG101Q9BSB4 218 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 TMEM14CQ9P0S9 112 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 ONECUT1Q9UBC0 465 aa11.28□□□□□ -0.6
RAB40A-201ENST00000304236 POLR3KQ9Y2Y1 108 aaPredicted RBP11.28□□□□□ -0.6
RAB40A-201ENST00000304236 KIR2DL5BA0A0G2JN68 375 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 KIR2DL5BA0A0G2JPC4 375 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 SIAH2O43255 324 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 SLC35B1P78383 322 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 RUSC1-AS1Q66K80 236 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 KIR2DL5AQ8N109 375 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 TBX15Q96SF7 602 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 C2orf88Q9BSF0 95 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 BEX4Q9NWD9 120 aaPredicted RBP11.27□□□□□ -0.61
RAB40A-201ENST00000304236 I3L2K1 104 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 BMPR1BO00238 502 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 TOMM40O96008 361 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 GPX1P07203 203 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 IGLC1P0CG04 106 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 HTR1DP28221 377 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 CEACAM3P40198 252 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 DLX1P56177 255 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 GNG5P63218 68 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 OR11H6Q8NGC7 330 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 FAM168AQ92567 244 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 C7orf69Q9H7B7 122 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 DPM3Q9P2X0 92 aa11.27□□□□□ -0.61
RAB40A-201ENST00000304236 SETD2Q9BYW2 2564 aaPredicted RBP11.26□□□□□ -0.61
RAB40A-201ENST00000304236 M0R1W7 72 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 ZNF253O75346 499 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 APELAP0DMC3 54 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 SRIP30626 198 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 CT83Q5H943 113 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 NUP35Q8NFH5 326 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
RAB40A-201ENST00000304236 KCNS1Q96KK3 526 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 RASL11BQ9BPW5 248 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 SSBP3Q9BWW4 388 aaPredicted RBP11.26□□□□□ -0.61
RAB40A-201ENST00000304236 WNT10AQ9GZT5 417 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 OTORQ9NRC9 128 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 ZNF586Q9NXT0 402 aa11.26□□□□□ -0.61
RAB40A-201ENST00000304236 RNF24Q9Y225 148 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms