RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 PET100P0DJ07 73 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 SULT1A1P50225 295 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 SNRPD3P62318 126 aaKnown RBP12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 SLC38A11Q08AI6 406 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 ZNF546Q86UE3 836 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 KIR2DL5AQ8N109 375 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 KIR2DL5BQ8NHK3 375 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 DCANP1Q8TF63 244 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 C11orf1Q9H5F2 150 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 SEPSECSQ9HD40 501 aaKnown RBP12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 RNF24Q9Y225 148 aa12.55□□□□□ -0.4
NDUFA3-201ENST00000303553 DNAH9Q9NYC9 4486 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 UBE2CO00762 179 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 ORM2P19652 201 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 S100A11P31949 105 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 DEFB131AP59861 70 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 RAP2BP61225 183 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 RAB31Q13636 194 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 SAMD13Q5VXD3 122 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 OR8I2Q8N0Y5 310 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 STPG3Q8N7X2 389 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 GPR82Q96P67 336 aa12.54□□□□□ -0.4
NDUFA3-201ENST00000303553 FAM24AA6NFZ4 105 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 E5RGE8 158 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 CST7O76096 145 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 SIX6O95475 246 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 LINC00869P0C866 280 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 TMEM252Q8N6L7 170 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 TMEM217Q8N7C4 229 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 OR1B1Q8NGR6 318 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 UQCC1Q9NVA1 299 aa12.53□□□□□ -0.4
NDUFA3-201ENST00000303553 HYPMO75409 117 aa12.52□□□□□ -0.41
NDUFA3-201ENST00000303553 ZNF688P0C7X2 276 aa12.52□□□□□ -0.41
NDUFA3-201ENST00000303553 GATA2P23769 480 aaPredicted RBP12.52□□□□□ -0.41
NDUFA3-201ENST00000303553 GALR1P47211 349 aa12.52□□□□□ -0.41
NDUFA3-201ENST00000303553 PLP1P60201 277 aa12.52□□□□□ -0.41
NDUFA3-201ENST00000303553 ARL16Q0P5N6 197 aa12.52□□□□□ -0.41
NDUFA3-201ENST00000303553 LRRC37A5PQ49AS3 106 aa12.52□□□□□ -0.41
NDUFA3-201ENST00000303553 HIGD1AQ9Y241 93 aa12.52□□□□□ -0.41
NDUFA3-201ENST00000303553 AGPAT2O15120 278 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 RPL35AP18077 110 aaKnown RBP12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 MEOX2P50222 304 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 H2BFSP57053 126 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 ATP6V1FQ16864 119 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 LEMD1Q68G75 181 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 Q6ZWC4 215 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 STHQ8IWL8 128 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 FAM24BQ8N5W8 94 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 TP53TG1Q9Y2A0 90 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 STAB2Q8WWQ8 2551 aa12.51□□□□□ -0.41
NDUFA3-201ENST00000303553 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 ZNF98A6NK75 572 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 OR5G3P0C626 314 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 ID1P41134 155 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 BAXQ07812 192 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 VWC2Q2TAL6 325 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 TMEM182Q6ZP80 229 aaPredicted RBP12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 PPP1R1CQ8WVI7 109 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 SLC25A22Q9H936 323 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 DOK5Q9P104 306 aa12.5□□□□□ -0.41
NDUFA3-201ENST00000303553 H3BRN7 92 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 CAMLGP49069 296 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 PSMB3P49720 205 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 ZNF124Q15973 351 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 RGS21Q2M5E4 152 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 PSMG4Q5JS54 123 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 SLC25A39Q9BZJ4 359 aaPredicted RBP12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 ARL6Q9H0F7 186 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 RETNQ9HD89 108 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 WDR83OSQ9Y284 106 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 ALG5Q9Y673 324 aa12.49□□□□□ -0.41
NDUFA3-201ENST00000303553 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
NDUFA3-201ENST00000303553 MPDU1O75352 247 aa12.48□□□□□ -0.41
NDUFA3-201ENST00000303553 RPL7P18124 248 aaKnown RBP12.48□□□□□ -0.41
NDUFA3-201ENST00000303553 Q6ZRG5 221 aa12.48□□□□□ -0.41
NDUFA3-201ENST00000303553 MGST2Q99735 147 aa12.48□□□□□ -0.41
NDUFA3-201ENST00000303553 SHANK2-AS3Q9BTD1 123 aa12.48□□□□□ -0.41
NDUFA3-201ENST00000303553 SLC25A32Q9H2D1 315 aa12.48□□□□□ -0.41
NDUFA3-201ENST00000303553 ELOA3CA0A087WX78 387 aaPredicted RBP12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 ISLRO14498 428 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 COX7A2P2O60397 106 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 SPP1P10451 314 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 EWSR1Q01844 656 aaKnown RBP eCLIP12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 DEFB135Q30KP9 77 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 TMEM41BQ5BJD5 291 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 MORN3Q6PF18 240 aaPredicted RBP12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 MED28Q9H204 178 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 ARV1Q9H2C2 271 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 OR5AC2Q9NZP5 309 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 TENM3Q9P273 2699 aa12.47□□□□□ -0.41
NDUFA3-201ENST00000303553 SPRY2O43597 315 aa12.46□□□□□ -0.41
NDUFA3-201ENST00000303553 MPC2O95563 127 aa12.46□□□□□ -0.41
NDUFA3-201ENST00000303553 ATF4P18848 351 aaPredicted RBP12.46□□□□□ -0.41
NDUFA3-201ENST00000303553 ACTL10Q5JWF8 245 aa12.46□□□□□ -0.41
NDUFA3-201ENST00000303553 OR5C1Q8NGR4 320 aa12.46□□□□□ -0.41
NDUFA3-201ENST00000303553 PFDN5Q99471 154 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms