RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CA1P00915 261 aaPredicted RBP17.52■□□□□ 0.4
TPM4-201ENST00000300933 RBX1P62877 108 aa17.52■□□□□ 0.4
TPM4-201ENST00000300933 CX3CL1P78423 397 aa17.52■□□□□ 0.4
TPM4-201ENST00000300933 UBTD1Q9HAC8 227 aa17.52■□□□□ 0.4
TPM4-201ENST00000300933 SIGLEC9Q9Y336 463 aa17.52■□□□□ 0.4
TPM4-201ENST00000300933 TRBV9A0A0B4J1U6 114 aa17.52■□□□□ 0.39
TPM4-201ENST00000300933 IGLC7A0M8Q6 106 aa17.52■□□□□ 0.39
TPM4-201ENST00000300933 C19orf84I3L1E1 186 aa17.52■□□□□ 0.39
TPM4-201ENST00000300933 LIPFP07098 398 aa17.52■□□□□ 0.39
TPM4-201ENST00000300933 LGALS7P47929 136 aa17.52■□□□□ 0.39
TPM4-201ENST00000300933 BMPR1BO00238 502 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 TIMM23O14925 209 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 MGST1P10620 155 aaKnown RBP17.51■□□□□ 0.39
TPM4-201ENST00000300933 ANKRD39Q53RE8 183 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 OR10J3Q5JRS4 329 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 BORCS7Q96B45 105 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 TIMD4Q96H15 378 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 SLC25A33Q9BSK2 321 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 PRORYQ9H606 182 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 OR4A5Q8NH83 315 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 TSKUQ8WUA8 353 aa17.51■□□□□ 0.39
TPM4-201ENST00000300933 MT-CO2P00403 227 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 RPL27AP46776 148 aaKnown RBP17.5■□□□□ 0.39
TPM4-201ENST00000300933 PLGLAQ15195 96 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 WDR73Q6P4I2 378 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 NHLRC2Q8NBF2 726 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 TSPOP30536 169 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 ORAOV1Q8WV07 137 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 C11orf52Q96A22 123 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 CDC42EP3Q9UKI2 254 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 CSMD2Q7Z408 3487 aa17.5■□□□□ 0.39
TPM4-201ENST00000300933 IGKV1D-37A0A075B6S9 117 aa17.49■□□□□ 0.39
TPM4-201ENST00000300933 ERASQ7Z444 233 aa17.49■□□□□ 0.39
TPM4-201ENST00000300933 PPP1R27Q86WC6 154 aa17.49■□□□□ 0.39
TPM4-201ENST00000300933 C22orf15Q8WYQ4 148 aa17.49■□□□□ 0.39
TPM4-201ENST00000300933 FNDC10F2Z333 226 aa17.49■□□□□ 0.39
TPM4-201ENST00000300933 MT-ND6P03923 174 aa17.49■□□□□ 0.39
TPM4-201ENST00000300933 PYYP10082 97 aa17.49■□□□□ 0.39
TPM4-201ENST00000300933 SSBP3Q9BWW4 388 aaPredicted RBP17.49■□□□□ 0.39
TPM4-201ENST00000300933 CELSR2Q9HCU4 2923 aa17.49■□□□□ 0.39
TPM4-201ENST00000300933 PRR31Q5SQ13 230 aa17.48■□□□□ 0.39
TPM4-201ENST00000300933 LOC105371242A0A075B767 164 aa17.48■□□□□ 0.39
TPM4-201ENST00000300933 KLHDC1Q8N7A1 406 aa17.48■□□□□ 0.39
TPM4-201ENST00000300933 CACNG8Q8WXS5 425 aa17.48■□□□□ 0.39
TPM4-201ENST00000300933 ZFP36P26651 326 aaKnown RBP17.47■□□□□ 0.39
TPM4-201ENST00000300933 SUB1P53999 127 aaKnown RBP eCLIP17.47■□□□□ 0.395e-9■■■■■ 42.5
TPM4-201ENST00000300933 RNF151Q2KHN1 245 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 TIGITQ495A1 244 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 PATE2Q6UY27 113 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 LY6G5BQ8NDX9 201 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 TNFRSF14Q92956 283 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 TECRQ9NZ01 308 aaKnown RBP17.47■□□□□ 0.39
TPM4-201ENST00000300933 CRYGBP07316 175 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 ORM2P19652 201 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 RPL19P84098 196 aaKnown RBP17.47■□□□□ 0.39
TPM4-201ENST00000300933 SLAQ13239 276 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 UBE2V1Q13404 147 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 Q56UQ5 140 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 TEX45Q8NA69 505 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 TP73-AS1Q9UF72 201 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 LY96Q9Y6Y9 160 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 MYO18BQ8IUG5 2567 aa17.47■□□□□ 0.39
TPM4-201ENST00000300933 APCSP02743 223 aa17.46■□□□□ 0.39
TPM4-201ENST00000300933 AMY1AP04745 511 aa17.46■□□□□ 0.39
TPM4-201ENST00000300933 COX11Q9Y6N1 276 aa17.46■□□□□ 0.39
TPM4-201ENST00000300933 USP9XQ93008 2570 aaPredicted RBP17.46■□□□□ 0.39
TPM4-201ENST00000300933 LY6LH3BQJ8 138 aa17.46■□□□□ 0.39
TPM4-201ENST00000300933 IBA57Q5T440 356 aaKnown RBP17.46■□□□□ 0.39
TPM4-201ENST00000300933 ZNF738Q8NE65 137 aa17.46■□□□□ 0.39
TPM4-201ENST00000300933 C8orf46Q8TAG6 207 aa17.46■□□□□ 0.39
TPM4-201ENST00000300933 GGTLC3B5MD39 225 aa17.45■□□□□ 0.38
TPM4-201ENST00000300933 HTR1DP28221 377 aa17.45■□□□□ 0.38
TPM4-201ENST00000300933 HES1Q14469 280 aa17.45■□□□□ 0.38
TPM4-201ENST00000300933 ITLN2Q8WWU7 325 aaPredicted RBP17.45■□□□□ 0.38
TPM4-201ENST00000300933 PSMB11A5LHX3 300 aa17.45■□□□□ 0.38
TPM4-201ENST00000300933 COX7A2P2O60397 106 aa17.45■□□□□ 0.38
TPM4-201ENST00000300933 ATP5IP56385 69 aaPredicted RBP17.45■□□□□ 0.38
TPM4-201ENST00000300933 FAM168AQ92567 244 aa17.45■□□□□ 0.38
TPM4-201ENST00000300933 SLC25A2Q9BXI2 301 aa17.45■□□□□ 0.38
TPM4-201ENST00000300933 ZNF355PQ9NSJ1 428 aa17.45■□□□□ 0.38
TPM4-201ENST00000300933 CNIH1O95406 144 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 LINC00479Q96M42 142 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 ALKBH7Q9BT30 221 aaPredicted RBP17.44■□□□□ 0.38
TPM4-201ENST00000300933 S4R3C0 116 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 INS-IGF2F8WCM5 200 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 C8orf88P0DMB2 117 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 ETFRF1Q6IPR1 90 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 ARL6IP6Q8N6S5 226 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 SRSF12Q8WXF0 261 aaKnown RBP17.44■□□□□ 0.38
TPM4-201ENST00000300933 FAM167A-AS1Q96KT0 104 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 TEX22C9J3V5 150 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 HLA-DQA1P01909 254 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 DYNAPQ8N1N2 210 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 OR1B1Q8NGR6 318 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 C18orf32Q8TCD1 76 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 CENPEQ02224 2701 aa17.44■□□□□ 0.38
TPM4-201ENST00000300933 TCRBV4S1A1TA0A5B7 111 aa17.43■□□□□ 0.38
TPM4-201ENST00000300933 GPR6P46095 362 aaPredicted RBP17.43■□□□□ 0.38
TPM4-201ENST00000300933 KLF17Q5JT82 389 aaPredicted RBP17.43■□□□□ 0.38
TPM4-201ENST00000300933 NEU4Q8WWR8 484 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms