RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ORMDL2Q53FV1 153 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 HEPN1Q6WQI6 88 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ANAPC13Q9BS18 74 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 RALGAPA2Q2PPJ7 1873 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 LINC00473A8K010 186 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 LCN12Q6JVE5 192 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 MAP1BP46821 2468 aaKnown RBP11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 OVOL1O14753 267 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 IL18BPO95998 194 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 CLPSP04118 112 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 C14orf178Q8N769 122 aaPredicted RBP11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 A0A087X0K7 114 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 PAX4O43316 350 aa11.12□□□□□ -0.63
CHRFAM7A-201ENST00000299847 CACNA1IQ9P0X4 2223 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SCN5AQ14524 2016 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 LCTP09848 1927 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 GAFA1Q96PS6 74 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 PRADC1Q9BSG0 188 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SIPA1L1O43166 1804 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ZNF479Q96JC4 524 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 LOC285556D6RIA3 1793 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 TET1Q8NFU7 2136 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 IGLV3-32A0A0A0MS00 114 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 GGTLC3B5MD39 225 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 PLNP26678 52 aa11.11□□□□□ -0.63
CHRFAM7A-201ENST00000299847 H0YJW9 148 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 TMEM256Q8N2U0 113 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 A0A0G2JMZ2 1700 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 LRRC37A2A6NM11 1700 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 A0A087WX48 190 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 NTN3O00634 580 aaPredicted RBP11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 NTF4P34130 210 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 GLRX5Q86SX6 157 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 CSTL1Q9H114 145 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 AMBPP02760 352 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 MTURNQ8N3F0 131 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 NUP35Q8NFH5 326 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 AGMATQ9BSE5 352 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ERG28Q9UKR5 140 aa11.1□□□□□ -0.63
CHRFAM7A-201ENST00000299847 SEC16AO15027 2179 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 TRAV13-1A0A0B4J241 112 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 F2Z2F3 143 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 PSCAO43653 123 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 GAS1P54826 345 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 JPT2Q9H910 190 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 PNRC2Q9NPJ4 139 aaKnown RBP11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 HIST3H2BBQ8N257 126 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 GUSBP1Q15486 140 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 Q71RC1 249 aaPredicted RBP11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 C1orf159Q96HA4 380 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 PLSCR4Q9NRQ2 329 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 ZNF48Q96MX3 618 aaPredicted RBP11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 NDUFAF3Q9BU61 184 aa11.09□□□□□ -0.63
CHRFAM7A-201ENST00000299847 BUB1B-PAK6H3BSN5 160 aa11.08□□□□□ -0.63
CHRFAM7A-201ENST00000299847 FGF16O43320 207 aa11.08□□□□□ -0.63
CHRFAM7A-201ENST00000299847 PRR30Q53SZ7 412 aaPredicted RBP11.08□□□□□ -0.63
CHRFAM7A-201ENST00000299847 LAMTOR3Q9UHA4 124 aa11.08□□□□□ -0.63
CHRFAM7A-201ENST00000299847 CABIN1Q9Y6J0 2220 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 COL4A6Q14031 1691 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 LINC00479Q96M42 142 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 SRRM5B3KS81 715 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 EFNA4P52798 201 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 SLC25A48Q6ZT89 311 aaKnown RBP11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 UBE2CO00762 179 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 DEFB130BP0DP73 79 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 DEFB130AP0DP74 79 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 C20orf204Q6ZNR8 217 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TMEM86BQ8N661 226 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 IGHV3-16A0A0C4DH30 117 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 KNCNA6PVL3 124 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 A8MWV9 139 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 INS-IGF2F8WCM5 200 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 INSP01308 110 aa11.08□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TOMM40O96008 361 aa11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 GAGE13Q4V321 117 aa11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 IGKV1D-17A0A075B6S4 117 aa11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 A0A0G2JRQ6 117 aa11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TMEM158Q8WZ71 300 aa11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 A0A1B0GWJ7 208 aa11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 C8orf49Q96NF6 230 aa11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 SPXQ9BT56 116 aa11.07□□□□□ -0.64
CHRFAM7A-201ENST00000299847 PSG3Q16557 428 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 RPP25LQ8N5L8 163 aaKnown RBP11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 TP53BP1Q12888 1972 aaPredicted RBP11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 ATXN8Q156A1 80 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 DTX2Q86UW9 622 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 MSRB2Q9Y3D2 182 aa11.06□□□□□ -0.64
CHRFAM7A-201ENST00000299847 DKK1O94907 266 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms