RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SCRT2Q9NQ03 307 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 SPCS1Q9Y6A9 102 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 ZGRF1Q86YA3 2104 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 IGHV1-18A0A0C4DH31 117 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 GNG7O60262 68 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 IGKV3-15P01624 115 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 DHRS13Q6UX07 377 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 TNRC6BQ9UPQ9 1833 aaKnown RBP9.21□□□□□ -0.93
TRUB1-201ENST00000298746 E7EUB6 86 aa9.21□□□□□ -0.93
TRUB1-201ENST00000298746 KLK10O43240 276 aa9.21□□□□□ -0.93
TRUB1-201ENST00000298746 CACNG7P62955 275 aa9.21□□□□□ -0.93
TRUB1-201ENST00000298746 SEC11AP67812 179 aa9.21□□□□□ -0.93
TRUB1-201ENST00000298746 C9orf106Q8NAJ2 232 aa9.21□□□□□ -0.93
TRUB1-201ENST00000298746 ZNF714Q96N38 554 aa9.21□□□□□ -0.93
TRUB1-201ENST00000298746 AKAP6Q13023 2319 aa9.21□□□□□ -0.93
TRUB1-201ENST00000298746 A0A0G2JLM5 398 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 TCRAP04437 139 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 ARMS2P0C7Q2 107 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 FCER1GP30273 86 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 VMA21Q3ZAQ7 101 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 PRSS57Q6UWY2 283 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 VSTM2AQ8TAG5 236 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 C18orf15Q96N68 181 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 GOSR1O95249 250 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 ATP5IP56385 69 aaPredicted RBP9.21□□□□□ -0.94
TRUB1-201ENST00000298746 WT1-ASQ06250 92 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 KIR3DS1Q14943 382 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 OSR1Q8TAX0 266 aaPredicted RBP9.21□□□□□ -0.94
TRUB1-201ENST00000298746 FAM222BQ8WU58 562 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 FMC1Q96HJ9 113 aa9.21□□□□□ -0.94
TRUB1-201ENST00000298746 SOX21Q9Y651 276 aaPredicted RBP9.21□□□□□ -0.94
TRUB1-201ENST00000298746 ACACAQ13085 2346 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 K7EQM0 130 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 COX8AP10176 69 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 FABP2P12104 132 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 PRB3Q04118 309 aaPredicted RBP9.2□□□□□ -0.94
TRUB1-201ENST00000298746 S100A7AQ86SG5 101 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 OR1N2Q8NGR9 330 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
TRUB1-201ENST00000298746 RABAC1Q9UI14 185 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 WISP2O76076 250 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 IGLC1P0CG04 106 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 ZCCHC24Q8N2G6 241 aaKnown RBP9.2□□□□□ -0.94
TRUB1-201ENST00000298746 OR4C13Q8NGP0 309 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 SPOCK3Q9BQ16 436 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 MALRD1Q5VYJ5 2156 aa9.2□□□□□ -0.94
TRUB1-201ENST00000298746 IFI27P40305 119 aaPredicted RBP9.19□□□□□ -0.94
TRUB1-201ENST00000298746 KIR2DL2P43627 348 aaPredicted RBP9.19□□□□□ -0.94
TRUB1-201ENST00000298746 JKAMPQ9P055 326 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 RPUSD1Q9UJJ7 312 aaKnown RBP9.19□□□□□ -0.94
TRUB1-201ENST00000298746 HIGD1AQ9Y241 93 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 A0A1B0GXF2 115 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 PAX2Q02962 417 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 NDUFA4L2Q9NRX3 87 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 NCR2O95944 276 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 CFHR2P36980 270 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 FAM120AOSQ5T036 256 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 ARRDC1-AS1Q9H2J1 176 aa9.19□□□□□ -0.94
TRUB1-201ENST00000298746 PTPRZ1P23471 2315 aaPredicted RBP9.18□□□□□ -0.94
TRUB1-201ENST00000298746 PRSS1P07477 247 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 TNFRSF1AP19438 455 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 MDS2Q8NDY4 140 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 CCL17Q92583 94 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 ZNF414Q96IQ9 312 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 SP9P0CG40 484 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 CNIH1O95406 144 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 SMAGPQ0VAQ4 97 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 DIAPH2-AS1Q14236 149 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 SLC25A48Q6ZT89 311 aaKnown RBP9.18□□□□□ -0.94
TRUB1-201ENST00000298746 ZADH2Q8N4Q0 377 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 ZNF747Q9BV97 191 aa9.18□□□□□ -0.94
TRUB1-201ENST00000298746 C9orf118A6NHY6 69 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 D6R8Y8 96 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 POU2AF1Q16633 256 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 MSMPQ1L6U9 139 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 C1orf185Q5T7R7 199 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 MBNL2Q5VZF2 373 aaKnown RBP9.17□□□□□ -0.94
TRUB1-201ENST00000298746 OR5AN1Q8NGI8 311 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 NEU4Q8WWR8 484 aaPredicted RBP9.17□□□□□ -0.94
TRUB1-201ENST00000298746 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 GTSF1LQ9H1H1 148 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 CRXO43186 299 aaPredicted RBP9.17□□□□□ -0.94
TRUB1-201ENST00000298746 RPL27AP46776 148 aaKnown RBP9.17□□□□□ -0.94
TRUB1-201ENST00000298746 RPS20P60866 119 aaKnown RBP9.17□□□□□ -0.94
TRUB1-201ENST00000298746 Q5PR19 223 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 SAMD13Q5VXD3 122 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 TMEM186Q96B77 213 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 COL25A1Q9BXS0 654 aaPredicted RBP9.17□□□□□ -0.94
TRUB1-201ENST00000298746 TPSG1Q9NRR2 321 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 RIF1Q5UIP0 2472 aaKnown RBP9.17□□□□□ -0.94
TRUB1-201ENST00000298746 CKS2P33552 79 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 FOXE3Q13461 319 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 RASL11BQ9BPW5 248 aa9.17□□□□□ -0.94
TRUB1-201ENST00000298746 FAM106CPP0CH98 169 aa9.16□□□□□ -0.94
TRUB1-201ENST00000298746 FAM106AQ4KMX7 169 aa9.16□□□□□ -0.94
TRUB1-201ENST00000298746 CLEC2AQ6UVW9 174 aa9.16□□□□□ -0.94
TRUB1-201ENST00000298746 S4R3C0 116 aa9.16□□□□□ -0.94
TRUB1-201ENST00000298746 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
TRUB1-201ENST00000298746 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms