RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 AWAT1Q58HT5 328 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 LEMD1Q68G75 181 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 CLEC19AQ6UXS0 136 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 STXBP6Q8NFX7 210 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 RPUSD4Q96CM3 377 aaKnown RBP17.76■□□□□ 0.43
PTX3-201ENST00000295927 FXYD5Q96DB9 178 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 YAE1D1Q9NRH1 226 aa17.76■□□□□ 0.43
PTX3-201ENST00000295927 GAR1Q9NY12 217 aaKnown RBP17.76■□□□□ 0.43
PTX3-201ENST00000295927 F6UZH7 168 aa17.75■□□□□ 0.43
PTX3-201ENST00000295927 TPPP2P59282 170 aa17.75■□□□□ 0.43
PTX3-201ENST00000295927 USF2Q15853 346 aaPredicted RBP17.75■□□□□ 0.43
PTX3-201ENST00000295927 PARLQ9H300 379 aa17.75■□□□□ 0.43
PTX3-201ENST00000295927 ZNF727A8MUV8 499 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 CFHR3Q02985 330 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 ZNF674Q2M3X9 581 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 TVP23CQ96ET8 276 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 SMIM7Q9BQ49 75 aa17.74■□□□□ 0.43
PTX3-201ENST00000295927 H3BRN7 92 aa17.73■□□□□ 0.43
PTX3-201ENST00000295927 IGLV1-40P01703 118 aa17.73■□□□□ 0.43
PTX3-201ENST00000295927 ZNF414Q96IQ9 312 aa17.73■□□□□ 0.43
PTX3-201ENST00000295927 SHANK2-AS3Q9BTD1 123 aa17.73■□□□□ 0.43
PTX3-201ENST00000295927 A0A1W2PRE2 83 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 DNASE2O00115 360 aaPredicted RBP17.72■□□□□ 0.43
PTX3-201ENST00000295927 PF4V1P10720 104 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 GP9P14770 177 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 FAM74A3Q4VXF1 159 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 ZNF600Q6ZNG1 722 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 PRSS22Q9GZN4 317 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 KLK15Q9H2R5 256 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 ACANP16112 2415 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 IGHV3-35A0A0C4DH35 117 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 SCO2A0A1W2PP80 73 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 C7orf77A4D0Y5 90 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 TGOLN2O43493 480 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 NDUFB4O95168 129 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 SNRPCP09234 159 aaKnown RBP17.72■□□□□ 0.43
PTX3-201ENST00000295927 DUX5Q96PT3 197 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 ATP6V0BQ99437 205 aa17.72■□□□□ 0.43
PTX3-201ENST00000295927 GGTLC3B5MD39 225 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 AKR1C3P42330 323 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.71■□□□□ 0.43
PTX3-201ENST00000295927 NPFFR1Q9GZQ6 430 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 GNB4Q9HAV0 340 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 RPS10P5Q9NQ39 176 aa17.71■□□□□ 0.43
PTX3-201ENST00000295927 SONP18583 2426 aaKnown RBP17.71■□□□□ 0.43
PTX3-201ENST00000295927 MYO9AB2RTY4 2548 aa17.71■□□□□ 0.42
PTX3-201ENST00000295927 TMEM88Q6PEY1 159 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 USMG5Q96IX5 58 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 ZNF702PQ9H963 129 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 SDF2L1Q9HCN8 221 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 SUMO1P63165 101 aaKnown RBP17.7■□□□□ 0.42
PTX3-201ENST00000295927 RHEBQ15382 184 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 ZNF343Q6P1L6 599 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 ZNF329Q86UD4 541 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 TMEM14CQ9P0S9 112 aa17.7■□□□□ 0.42
PTX3-201ENST00000295927 NBEAP1P0C6P0 100 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 TOMM20LQ6UXN7 152 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 LCNL1Q6ZST4 164 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 S100A7AQ86SG5 101 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 CBLN2Q8IUK8 224 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 DERL1Q9BUN8 251 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 NAT8Q9UHE5 227 aa17.69■□□□□ 0.42
PTX3-201ENST00000295927 TMEM241Q24JQ0 296 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 BLNKQ8WV28 456 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 C11orf52Q96A22 123 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 ZNF98A6NK75 572 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 PPP5D1E7EU14 171 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 IGHG4P01861 327 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 RAB9AP51151 201 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 PNRC1Q12796 327 aaPredicted RBP17.68■□□□□ 0.42
PTX3-201ENST00000295927 TMEM86BQ8N661 226 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 ZFAND3Q9H8U3 227 aa17.68■□□□□ 0.42
PTX3-201ENST00000295927 HNF1AP20823 631 aa17.67■□□□□ 0.42
PTX3-201ENST00000295927 RABAC1Q9UI14 185 aa17.67■□□□□ 0.42
PTX3-201ENST00000295927 IGHV3OR16-8A0A075B7F1 116 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 BMPR1BO00238 502 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 BPIFA4PQ86YQ2 179 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 ELOVL1Q9BW60 279 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 IGHV3-11P01762 117 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 CRYBB3P26998 211 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 PSMB8P28062 276 aa17.66■□□□□ 0.42
PTX3-201ENST00000295927 RANP62826 216 aaKnown RBP17.66■□□□□ 0.42
PTX3-201ENST00000295927 A0A0G2JLM5 398 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 H3BTX0 84 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 HIST1H1EP10412 219 aaKnown RBP17.65■□□□□ 0.42
PTX3-201ENST00000295927 ARL3P36405 182 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 RELQ04864 619 aaPredicted RBP17.65■□□□□ 0.42
PTX3-201ENST00000295927 C10orf99Q6UWK7 81 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 ZNF586Q9NXT0 402 aa17.65■□□□□ 0.42
PTX3-201ENST00000295927 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.64■□□□□ 0.42
PTX3-201ENST00000295927 TRBV12-3P01733 135 aa17.64■□□□□ 0.42
PTX3-201ENST00000295927 MRPS12O15235 138 aaKnown RBP17.64■□□□□ 0.41
PTX3-201ENST00000295927 MYCNOSP40205 109 aa17.64■□□□□ 0.41
PTX3-201ENST00000295927 RPL23P62829 140 aaKnown RBP17.64■□□□□ 0.41
PTX3-201ENST00000295927 SMR3AQ99954 134 aa17.64■□□□□ 0.41
PTX3-201ENST00000295927 TMEM89A2RUT3 159 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 B4DEV8 164 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 ADIRFQ15847 76 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 Q8N2B8 174 aa17.63■□□□□ 0.41
PTX3-201ENST00000295927 OR4F17Q8NGA8 305 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms