RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 CCL17Q92583 94 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 NDFIP1Q9BT67 221 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 MRPL20Q9BYC9 149 aaKnown RBP10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 PLEKHA3Q9HB20 300 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 TP73-AS1Q9UF72 201 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 TRGV10A0A0A0MS01 117 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 GNG4P50150 75 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 RHOBP62745 196 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 GNG5P63218 68 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 LRRC10Q5BKY1 277 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 TEX50A0A1B0GTY4 177 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 TYMSP04818 313 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 WNT10AQ9GZT5 417 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 TMEM14BQ9NUH8 114 aa10.74□□□□□ -0.69
KCNIP3-201ENST00000295225 NTF3P20783 257 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 HCP5Q6MZN7 132 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 SIGLEC15Q6ZMC9 328 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 GAFA1Q96PS6 74 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 SRSF8Q9BRL6 282 aaKnown RBP10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 GNB4Q9HAV0 340 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 F2RL2O00254 374 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 CRYGBP07316 175 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 LYPD2Q6UXB3 125 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 FA2HQ7L5A8 372 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 C1orf43Q9BWL3 253 aa10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 MRPS16Q9Y3D3 137 aaKnown RBP10.73□□□□□ -0.69
KCNIP3-201ENST00000295225 A0A087WX48 190 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 RS1O15537 224 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 MOSP00540 346 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 FOXL1Q12952 345 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 AMMECR1LQ6DCA0 310 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 NEUROG1Q92886 237 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 V9GYV3 84 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 A0A1W2PRX2 142 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 FOXE3Q13461 319 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 IL36BQ9NZH7 164 aa10.72□□□□□ -0.69
KCNIP3-201ENST00000295225 LHBP01229 141 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 CGB3P0DN86 165 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 CGB7P0DN87 165 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 PIP4P1Q86T03 277 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 ZNF355PQ9NSJ1 428 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 RNF7Q9UBF6 113 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 FBXL7Q9UJT9 491 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 LYNX1G3V0Z9 82 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 ZNF207O43670 478 aaKnown RBP10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 ENSAO43768 121 aaKnown RBP10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 IGLC1P0CG04 106 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 LYNX1P0DP58 116 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 EDN2P20800 178 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 UQCRFS1P47985 274 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 HINT1P49773 126 aaPredicted RBP10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 PRR20EP86478 221 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 PRR20CP86479 221 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 PRR20DP86480 221 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 PRR20BP86481 221 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 PRR20AP86496 221 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 TIMM23BQ5SRD1 257 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 Q6ZN92 141 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 NPIPB3Q92617 1050 aa10.71□□□□□ -0.69
KCNIP3-201ENST00000295225 SRIP30626 198 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 CAMPP49913 170 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 MZT1Q08AG7 82 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 RPEL1Q2QD12 228 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 LCN12Q6JVE5 192 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 ZNF439Q8NDP4 499 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 OR4B1Q8NGF8 309 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 BTF3L4Q96K17 158 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 FNDC4Q9H6D8 234 aaPredicted RBP10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 SPANXA1Q9NS26 97 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 TMEM106BQ9NUM4 274 aa10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 TIMM8BQ9Y5J9 83 aaPredicted RBP10.71□□□□□ -0.7
KCNIP3-201ENST00000295225 TM4SF5O14894 197 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 MPDU1O75352 247 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 ORM2P19652 201 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 CNTFRP26992 372 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 STUMQ69YW2 141 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 ST6GALNAC6Q969X2 333 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 A0A1W2PRD5 423 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 A0A1W2PRF3 423 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 A0A1W2PRM7 423 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 PMCHL1Q16048 86 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 OR5AU1Q8NGC0 362 aa10.7□□□□□ -0.7
KCNIP3-201ENST00000295225 PF4P02776 101 aa10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 GLRXP35754 106 aa10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 UBE2L3P68036 154 aaKnown RBP10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 FOXA2Q9Y261 457 aaPredicted RBP10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 HRNRQ86YZ3 2850 aaPredicted RBP10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 HIST1H1AQ02539 215 aaPredicted RBP10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 WT1-ASQ06250 92 aa10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 PNKDQ8N490 385 aa10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 ZADH2Q8N4Q0 377 aa10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 SIRPDQ9H106 197 aa10.69□□□□□ -0.7
KCNIP3-201ENST00000295225 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.68□□□□□ -0.7
KCNIP3-201ENST00000295225 UPK2O00526 184 aa10.68□□□□□ -0.7
KCNIP3-201ENST00000295225 ZNF253O75346 499 aa10.68□□□□□ -0.7
KCNIP3-201ENST00000295225 RNASE2P10153 161 aaKnown RBP10.68□□□□□ -0.7
KCNIP3-201ENST00000295225 IBA57Q5T440 356 aaKnown RBP10.68□□□□□ -0.7
KCNIP3-201ENST00000295225 COMMD5Q9GZQ3 224 aa10.68□□□□□ -0.7
KCNIP3-201ENST00000295225 S4R3C0 116 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms