RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ARF6P62330 175 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 APOHP02749 345 aaPredicted RBP11.82□□□□□ -0.52
CCNF-201ENST00000293968 LIPFP07098 398 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 ZNF833PQ6ZTB9 187 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 TMEM167AQ8TBQ9 72 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 SPAARA0A1B0GVQ0 90 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 C22orf46C9J442 243 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 FXYD7P58549 80 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 SEM1Q6ZVN7 128 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 ZADH2Q8N4Q0 377 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 HIGD1AQ9Y241 93 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 DYSFO75923 2080 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 TMEM265A0A087WTH1 108 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 SP9P0CG40 484 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 C12orf54Q6X4T0 127 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 C22orf34Q6ZV56 151 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
CCNF-201ENST00000293968 IGHV2-70DA0A0C4DH43 119 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 RPL27AP46776 148 aaKnown RBP11.81□□□□□ -0.52
CCNF-201ENST00000293968 LRRC10Q5BKY1 277 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 NAA38Q9BRA0 125 aaKnown RBP11.81□□□□□ -0.52
CCNF-201ENST00000293968 HSPB8Q9UJY1 196 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 HLA-DRB1P01911 266 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 CNTFRP26992 372 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 FAM222BQ8WU58 562 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 FMC1Q96HJ9 113 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 S4R3C0 116 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 TOMM40O96008 361 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 CD40P25942 277 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 LYPD2Q6UXB3 125 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 Q71RC1 249 aaPredicted RBP11.81□□□□□ -0.52
CCNF-201ENST00000293968 TMEM116Q8NCL8 245 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 OR5AN1Q8NGI8 311 aa11.81□□□□□ -0.52
CCNF-201ENST00000293968 PPIAL4EA0A075B759 164 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 PPIAL4DF5H284 164 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 PPIAL4FP0DN26 164 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 NHLH1Q02575 133 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 BVES-AS1Q5T3Y7 98 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 DEFB124Q8NES8 71 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 CHCHD1Q96BP2 118 aaKnown RBP11.8□□□□□ -0.52
CCNF-201ENST00000293968 A0A1B0GXF2 115 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 TEX45Q8NA69 505 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 COX7A1P24310 79 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 BPIFA4PQ86YQ2 179 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 DYNLRB1Q9NP97 96 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 AP5S1Q9NUS5 200 aa11.8□□□□□ -0.52
CCNF-201ENST00000293968 CNIH1O95406 144 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 TRAV30A0A087WSZ9 112 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 IGLV3-9A0A075B6K5 115 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 CGB1A6NKQ9 187 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 GATA4P43694 442 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 SAPCD1Q5SSQ6 148 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 TAX1BP3O14907 124 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 ARMS2P0C7Q2 107 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 TMEM186Q96B77 213 aa11.79□□□□□ -0.52
CCNF-201ENST00000293968 GPR183P32249 361 aa11.78□□□□□ -0.52
CCNF-201ENST00000293968 RASL11BQ9BPW5 248 aa11.78□□□□□ -0.52
CCNF-201ENST00000293968 FAM120AOSQ5T036 256 aa11.78□□□□□ -0.52
CCNF-201ENST00000293968 TMEM108Q6UXF1 575 aa11.78□□□□□ -0.52
CCNF-201ENST00000293968 A0A1B0GUT8 65 aa11.77□□□□□ -0.52
CCNF-201ENST00000293968 WFDC3Q8IUB2 231 aa11.77□□□□□ -0.52
CCNF-201ENST00000293968 NCOR1P1Q9H4R4 102 aa11.77□□□□□ -0.52
CCNF-201ENST00000293968 HILPDAQ9Y5L2 63 aa11.77□□□□□ -0.52
CCNF-201ENST00000293968 PSG9Q00887 426 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 RIGQ13278 110 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 Q86TA4 180 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 RAB37Q96AX2 223 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 FBXL15Q9H469 300 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 CST9LQ9H4G1 147 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 C7orf69Q9H7B7 122 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 CSN1S1P47710 185 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 THAP8Q8NA92 274 aa11.77□□□□□ -0.53
CCNF-201ENST00000293968 KLK10O43240 276 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 LTAP01374 205 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 PET117Q6UWS5 81 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 MBD3L4A6NDZ8 208 aaPredicted RBP11.76□□□□□ -0.53
CCNF-201ENST00000293968 MBD3L3A6NE82 208 aaPredicted RBP11.76□□□□□ -0.53
CCNF-201ENST00000293968 MBD3L5A6NJ08 208 aaPredicted RBP11.76□□□□□ -0.53
CCNF-201ENST00000293968 C19orf67A6NJJ6 358 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 CT45A10P0DMU9 189 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 MBD3L2Q8NHZ7 208 aaPredicted RBP11.76□□□□□ -0.53
CCNF-201ENST00000293968 C8orf46Q8TAG6 207 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 C17orf77Q96MU5 243 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 SOX21Q9Y651 276 aaPredicted RBP11.76□□□□□ -0.53
CCNF-201ENST00000293968 C1orf185Q5T7R7 199 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 GUCD1Q96NT3 240 aa11.76□□□□□ -0.53
CCNF-201ENST00000293968 C7orf71A4D174 169 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 C17orf100A8MU93 164 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 K7EQM0 130 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 CDKN1BP46527 198 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 MEF2CQ06413 473 aaPredicted RBP11.75□□□□□ -0.53
CCNF-201ENST00000293968 TMEM30BQ3MIR4 351 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 OR4A5Q8NH83 315 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 FAM215AQ9Y5M1 114 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 IGLV2-23P01705 113 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 FAM169BQ8N8A8 192 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 GAGE10A6NGK3 116 aa11.75□□□□□ -0.53
CCNF-201ENST00000293968 GP9P14770 177 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms