RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TNXAQ16473 311 aa13.33□□□□□ -0.28
CPSF4-201ENST00000292476 SLC25A2Q9BXI2 301 aa13.33□□□□□ -0.28
CPSF4-201ENST00000292476 GSX1Q9H4S2 264 aaPredicted RBP13.33□□□□□ -0.28
CPSF4-201ENST00000292476 COX7A2P2O60397 106 aa13.32□□□□□ -0.28
CPSF4-201ENST00000292476 ESDP10768 282 aa13.32□□□□□ -0.28
CPSF4-201ENST00000292476 C9orf152Q5JTZ5 239 aa13.32□□□□□ -0.28
CPSF4-201ENST00000292476 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
CPSF4-201ENST00000292476 IGF2BP2-AS1Q96M15 143 aa13.32□□□□□ -0.28
CPSF4-201ENST00000292476 NOL4LQ96MY1 436 aaPredicted RBP13.32□□□□□ -0.28
CPSF4-201ENST00000292476 GNB1LQ9BYB4 327 aa13.32□□□□□ -0.28
CPSF4-201ENST00000292476 FBXL15Q9H469 300 aa13.32□□□□□ -0.28
CPSF4-201ENST00000292476 CDC42EP3Q9UKI2 254 aa13.32□□□□□ -0.28
CPSF4-201ENST00000292476 TMEM11P17152 192 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 CNTFRP26992 372 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 ADMP35318 185 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 UBE2L3P68036 154 aaKnown RBP13.31□□□□□ -0.28
CPSF4-201ENST00000292476 IQCJQ1A5X6 159 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 C10orf113Q5VZT2 155 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 STXBP6Q8NFX7 210 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 E7EUB6 86 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 CORTO00230 105 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 CRYGCP07315 174 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 FOSL1P15407 271 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 HNF1AP20823 631 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 GATA2P23769 480 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-201ENST00000292476 DDTP30046 118 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 MLANAQ16655 118 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 C5orf64Q2M2E5 130 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 DYNAPQ8N1N2 210 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 Q8N6K4 173 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 OR2T6Q8NHC8 308 aa13.31□□□□□ -0.28
CPSF4-201ENST00000292476 FNDC4Q9H6D8 234 aaPredicted RBP13.31□□□□□ -0.28
CPSF4-201ENST00000292476 CR1P17927 2039 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 IGKV1D-37A0A075B6S9 117 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 TRAV40A0A0B4J280 105 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 CNIH1O95406 144 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 SUMO1P63165 101 aaKnown RBP13.3□□□□□ -0.28
CPSF4-201ENST00000292476 PAFAH1B2P68402 229 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 CX3CL1P78423 397 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 MRGPRG-AS1Q2M3A8 158 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 Q71RC1 249 aaPredicted RBP13.3□□□□□ -0.28
CPSF4-201ENST00000292476 REC114Q7Z4M0 266 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 PIP4P2Q8N4L2 257 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 OR5AU1Q8NGC0 362 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 OR1L6Q8NGR2 347 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 AJUBAQ96IF1 538 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 TRGV9Q99603 122 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 MEGF9Q9H1U4 602 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 TPSG1Q9NRR2 321 aa13.3□□□□□ -0.28
CPSF4-201ENST00000292476 NCBP2LA6PVI3 153 aaKnown RBP13.29□□□□□ -0.28
CPSF4-201ENST00000292476 SLC17A3O00476 420 aa13.29□□□□□ -0.28
CPSF4-201ENST00000292476 IGLV2-8P01709 118 aa13.29□□□□□ -0.28
CPSF4-201ENST00000292476 Q0VG73 95 aa13.29□□□□□ -0.28
CPSF4-201ENST00000292476 C22orf15Q8WYQ4 148 aa13.29□□□□□ -0.28
CPSF4-201ENST00000292476 TMEM190Q8WZ59 177 aa13.29□□□□□ -0.28
CPSF4-201ENST00000292476 NPIPB3Q92617 1050 aa13.29□□□□□ -0.28
CPSF4-201ENST00000292476 PAXXQ9BUH6 204 aa13.29□□□□□ -0.28
CPSF4-201ENST00000292476 MRPL18Q9H0U6 180 aaKnown RBP13.29□□□□□ -0.28
CPSF4-201ENST00000292476 ZNF355PQ9NSJ1 428 aa13.29□□□□□ -0.28
CPSF4-201ENST00000292476 IGLC7A0M8Q6 106 aa13.28□□□□□ -0.28
CPSF4-201ENST00000292476 TGFAP01135 160 aa13.28□□□□□ -0.28
CPSF4-201ENST00000292476 RD3LP0DJH9 198 aa13.28□□□□□ -0.28
CPSF4-201ENST00000292476 ZNF562Q6V9R5 426 aa13.28□□□□□ -0.28
CPSF4-201ENST00000292476 FAM231DQ6ZW35 169 aa13.28□□□□□ -0.28
CPSF4-201ENST00000292476 SRSF12Q8WXF0 261 aaKnown RBP13.28□□□□□ -0.28
CPSF4-201ENST00000292476 SMIM12Q96EX1 92 aa13.28□□□□□ -0.28
CPSF4-201ENST00000292476 WNK2Q9Y3S1 2297 aa13.28□□□□□ -0.28
CPSF4-201ENST00000292476 RANP62826 216 aaKnown RBP13.28□□□□□ -0.28
CPSF4-201ENST00000292476 C10orf55Q5SWW7 151 aa13.28□□□□□ -0.28
CPSF4-201ENST00000292476 MTORP42345 2549 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 SMIM27A0A1W2PRY6 76 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 LY6G6DO95868 133 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 CRISP2P16562 243 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 CBLN1P23435 193 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 CD24P25063 80 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 TPPP2P59282 170 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 RAB4BP61018 213 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 OR5I1Q13606 314 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 RASL11AQ6T310 242 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 PATE2Q6UY27 113 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 TMEM116Q8NCL8 245 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 CMTM2Q8TAZ6 248 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 C14orf144Q96I85 54 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 RASL11BQ9BPW5 248 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 CHRDL1Q9BU40 450 aa13.27□□□□□ -0.29
CPSF4-201ENST00000292476 ZMAT5Q9UDW3 170 aaKnown RBP13.27□□□□□ -0.29
CPSF4-201ENST00000292476 ZANQ9Y493 2812 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 FCN1O00602 326 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 IGHV4-31P0DP07 118 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 PLP1P60201 277 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 FXYD3Q14802 87 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 LBHQ53QV2 105 aaPredicted RBP13.26□□□□□ -0.29
CPSF4-201ENST00000292476 IBA57Q5T440 356 aaKnown RBP13.26□□□□□ -0.29
CPSF4-201ENST00000292476 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 ZNF329Q86UD4 541 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 OR8I2Q8N0Y5 310 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 TEX29Q8N6K0 151 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 FXYD5Q96DB9 178 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 CSPG4Q6UVK1 2322 aa13.26□□□□□ -0.29
CPSF4-201ENST00000292476 PEX7O00628 323 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms