RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 CLN5O75503 358 aa11.84□□□□□ -0.51
NCK1-201ENST00000288986 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
NCK1-201ENST00000288986 OR5G3P0C626 314 aa11.84□□□□□ -0.51
NCK1-201ENST00000288986 STAG3L2P0CL84 134 aa11.84□□□□□ -0.51
NCK1-201ENST00000288986 STAG3L3P0CL85 134 aa11.84□□□□□ -0.51
NCK1-201ENST00000288986 FGF8P55075 233 aaPredicted RBP11.84□□□□□ -0.51
NCK1-201ENST00000288986 ZNF506Q5JVG8 444 aa11.84□□□□□ -0.51
NCK1-201ENST00000288986 C10orf91Q5T1B1 145 aa11.84□□□□□ -0.51
NCK1-201ENST00000288986 RBFOX3A6NFN3 312 aa11.83□□□□□ -0.52
NCK1-201ENST00000288986 LINC01619G3V211 115 aa11.83□□□□□ -0.52
NCK1-201ENST00000288986 TRBV12-3P01733 135 aa11.83□□□□□ -0.52
NCK1-201ENST00000288986 RHOBP62745 196 aa11.83□□□□□ -0.52
NCK1-201ENST00000288986 PEA15Q15121 130 aa11.83□□□□□ -0.52
NCK1-201ENST00000288986 CLEC19AQ6UXS0 136 aa11.83□□□□□ -0.52
NCK1-201ENST00000288986 VN1R17PQ8TDU5 208 aa11.83□□□□□ -0.52
NCK1-201ENST00000288986 SEPSECSQ9HD40 501 aaKnown RBP11.83□□□□□ -0.52
NCK1-201ENST00000288986 TREM1Q9NP99 234 aa11.83□□□□□ -0.52
NCK1-201ENST00000288986 TRBV7-1A0A0A6YYK4 115 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 A0A1W2PPV4 95 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
NCK1-201ENST00000288986 EIF3GO75821 320 aaKnown RBP eCLIP11.82□□□□□ -0.52
NCK1-201ENST00000288986 CLEC3BP05452 202 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 FCGR2BP31994 310 aaPredicted RBP11.82□□□□□ -0.52
NCK1-201ENST00000288986 PLP1P60201 277 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 GATAD1Q8WUU5 269 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 TMEM37Q8WXS4 190 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.82□□□□□ -0.52
NCK1-201ENST00000288986 LOC102723971A0A1B0GUV8 181 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 IGKV1-17P01599 117 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 ADCYAP1P18509 176 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 FHL3Q13643 280 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 KHDC3LQ587J8 217 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 CCDC140Q96MF4 163 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 RARRES2Q99969 163 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 EIF5A2Q9GZV4 153 aaKnown RBP11.82□□□□□ -0.52
NCK1-201ENST00000288986 C21orf62Q9NYP8 219 aa11.82□□□□□ -0.52
NCK1-201ENST00000288986 PPP5D1E7EU14 171 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 HMGB3O15347 200 aaKnown RBP11.81□□□□□ -0.52
NCK1-201ENST00000288986 BCL2P10415 239 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 CD33P20138 364 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 SLURP1P55000 103 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 ICAM4Q14773 271 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 FAM209BQ5JX69 171 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 ZNF502Q8TBZ5 544 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 RNF2Q99496 336 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 FUT9Q9Y231 359 aa11.81□□□□□ -0.52
NCK1-201ENST00000288986 CARHSP1Q9Y2V2 147 aaKnown RBP11.81□□□□□ -0.52
NCK1-201ENST00000288986 NDUFS6O75380 124 aaKnown RBP11.8□□□□□ -0.52
NCK1-201ENST00000288986 GPR183P32249 361 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 PSMB3P49720 205 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 MFAP4P55083 255 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 Q56UQ5 140 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 SPATA31B1PQ5VZV4 182 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 PATE2Q6UY27 113 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 LINC00482Q8N8I6 264 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 PFDN5Q99471 154 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 TXN2Q99757 166 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 SEC11CQ9BY50 192 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 MRPL32Q9BYC8 188 aaKnown RBP11.8□□□□□ -0.52
NCK1-201ENST00000288986 DNAJC4Q9NNZ3 241 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 TRAV30A0A087WSZ9 112 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 HOXD3P31249 432 aaPredicted RBP11.8□□□□□ -0.52
NCK1-201ENST00000288986 ARL3P36405 182 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
NCK1-201ENST00000288986 NPBWR1P48145 328 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 HAGHQ16775 308 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 RPEL1Q2QD12 228 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 FAM78BQ5VT40 261 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 OR1L4Q8NGR5 311 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 NARS2Q96I59 477 aaKnown RBP11.8□□□□□ -0.52
NCK1-201ENST00000288986 TMPRSS5Q9H3S3 457 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 GNG13Q9P2W3 67 aa11.8□□□□□ -0.52
NCK1-201ENST00000288986 OR2T8A6NH00 312 aa11.79□□□□□ -0.52
NCK1-201ENST00000288986 BMPR1BO00238 502 aa11.79□□□□□ -0.52
NCK1-201ENST00000288986 CXorf1O96002 111 aa11.79□□□□□ -0.52
NCK1-201ENST00000288986 SFTA3P0C7M3 94 aa11.79□□□□□ -0.52
NCK1-201ENST00000288986 MIR17HGQ75NE6 70 aa11.79□□□□□ -0.52
NCK1-201ENST00000288986 DLX4Q92988 240 aaPredicted RBP11.79□□□□□ -0.52
NCK1-201ENST00000288986 MANBALQ9NQG1 85 aa11.79□□□□□ -0.52
NCK1-201ENST00000288986 ELOA3CA0A087WX78 387 aaPredicted RBP11.78□□□□□ -0.52
NCK1-201ENST00000288986 GGCTO75223 188 aaKnown RBP11.78□□□□□ -0.52
NCK1-201ENST00000288986 IFNA1P01562 189 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 SRP19P09132 144 aaKnown RBP11.78□□□□□ -0.52
NCK1-201ENST00000288986 ARL14EPLP0DKL9 152 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 PSG1P11464 419 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 PPT1P50897 306 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 YPEL3P61236 119 aaPredicted RBP11.78□□□□□ -0.52
NCK1-201ENST00000288986 TIGITQ495A1 244 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 WFDC9Q8NEX5 89 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 SLC35B3Q9H1N7 401 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 VAX2Q9UIW0 290 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 MGAM2Q2M2H8 2515 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 NOTCH3Q9UM47 2321 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 CMYA5Q8N3K9 4069 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 OR2C1O95371 312 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 ATP6V0BQ99437 205 aa11.78□□□□□ -0.52
NCK1-201ENST00000288986 TECRQ9NZ01 308 aaKnown RBP11.78□□□□□ -0.52
NCK1-201ENST00000288986 TOMM40O96008 361 aa11.77□□□□□ -0.53
NCK1-201ENST00000288986 FABP1P07148 127 aa11.77□□□□□ -0.53
NCK1-201ENST00000288986 MORN5Q5VZ52 161 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms