RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 NDUFA4L2Q9NRX3 87 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 TYMSP04818 313 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 CX3CL1P78423 397 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 C11orf42Q8N5U0 333 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 NUP35Q8NFH5 326 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 RAB1BQ9H0U4 201 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 DCHS1Q96JQ0 3298 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 ZFHX4Q86UP3 3567 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 IGHV2-26A0A0B4J1V2 119 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 IZUMO1RA6ND01 250 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 C9JCJ5 164 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 SLAQ13239 276 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 IGFL4Q6B9Z1 124 aa12.83□□□□□ -0.36
SMAD6-201ENST00000288840 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
SMAD6-201ENST00000288840 SPACA3Q8IXA5 215 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 ZNF596Q8TC21 504 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 RNASEH2CQ8TDP1 164 aaKnown RBP12.82□□□□□ -0.36
SMAD6-201ENST00000288840 M0R3E3 92 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 ZNF207O43670 478 aaKnown RBP12.82□□□□□ -0.36
SMAD6-201ENST00000288840 ORM1P02763 201 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 GUSBP1Q15486 140 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 TMEM167AQ8TBQ9 72 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 GPR82Q96P67 336 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 GNB1LQ9BYB4 327 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 OR2J3O76001 311 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 IGFL2Q6UWQ7 119 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 AP1S3Q96PC3 154 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 UBTD1Q9HAC8 227 aa12.82□□□□□ -0.36
SMAD6-201ENST00000288840 LOXP28300 417 aaPredicted RBP12.81□□□□□ -0.36
SMAD6-201ENST00000288840 C1orf194Q5T5A4 169 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 DMRTA1Q5VZB9 504 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 BPIFA4PQ86YQ2 179 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 WFDC3Q8IUB2 231 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 SLC25A2Q9BXI2 301 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 C3orf79P0CE67 100 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 GATA4P43694 442 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 FXYD7P58549 80 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 LEPROTL1O95214 131 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 Q8N7P7 452 aa12.81□□□□□ -0.36
SMAD6-201ENST00000288840 BMPR1BO00238 502 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 GPX1P07203 203 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 OR5AL1P0C617 328 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 COX19Q49B96 90 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 C5orf17Q8NAS9 161 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 OR4B1Q8NGF8 309 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 OR5AN1Q8NGI8 311 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 GRAMD2BQ96HH9 432 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 B9A039 149 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 CEACAM8P31997 349 aaPredicted RBP12.8□□□□□ -0.36
SMAD6-201ENST00000288840 PTTG1IPP53801 180 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 HBBP68871 147 aa12.8□□□□□ -0.36
SMAD6-201ENST00000288840 USP9YO00507 2555 aaPredicted RBP12.8□□□□□ -0.36
SMAD6-201ENST00000288840 TET2Q6N021 2002 aaPredicted RBP12.79□□□□□ -0.36
SMAD6-201ENST00000288840 DMXL1Q9Y485 3027 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 IGHV1-3A0A0C4DH29 117 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 FAM169BQ8N8A8 192 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.79□□□□□ -0.36
SMAD6-201ENST00000288840 A0A1W2PS18 150 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 CEACAM3P40198 252 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 TMPRSS3P57727 454 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 NHLH1Q02575 133 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 MIEN1Q9BRT3 115 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 LAMA5O15230 3695 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 SCGB2A1O75556 95 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 TMEM136Q6ZRR5 245 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 ZNF329Q86UD4 541 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 RPP21Q9H633 154 aaKnown RBP12.79□□□□□ -0.36
SMAD6-201ENST00000288840 SIGLEC9Q9Y336 463 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 TLN2Q9Y4G6 2542 aa12.79□□□□□ -0.36
SMAD6-201ENST00000288840 SETD2Q9BYW2 2564 aaPredicted RBP12.78□□□□□ -0.36
SMAD6-201ENST00000288840 LIPFP07098 398 aa12.78□□□□□ -0.36
SMAD6-201ENST00000288840 ZNF672Q499Z4 452 aaPredicted RBP12.78□□□□□ -0.36
SMAD6-201ENST00000288840 ZNF503Q96F45 646 aa12.78□□□□□ -0.36
SMAD6-201ENST00000288840 YPEL3P61236 119 aaPredicted RBP12.78□□□□□ -0.36
SMAD6-201ENST00000288840 ZNF833PQ6ZTB9 187 aa12.78□□□□□ -0.36
SMAD6-201ENST00000288840 OR2T8A6NH00 312 aa12.78□□□□□ -0.36
SMAD6-201ENST00000288840 SIAH2O43255 324 aa12.78□□□□□ -0.36
SMAD6-201ENST00000288840 THBDP07204 575 aa12.78□□□□□ -0.36
SMAD6-201ENST00000288840 UQCR10Q9UDW1 63 aa12.78□□□□□ -0.36
SMAD6-201ENST00000288840 CGB3P0DN86 165 aa12.77□□□□□ -0.36
SMAD6-201ENST00000288840 CGB7P0DN87 165 aa12.77□□□□□ -0.36
SMAD6-201ENST00000288840 CA7P43166 264 aa12.77□□□□□ -0.36
SMAD6-201ENST00000288840 COL5A1-AS1Q5SY13 56 aa12.77□□□□□ -0.36
SMAD6-201ENST00000288840 PATE2Q6UY27 113 aa12.77□□□□□ -0.36
SMAD6-201ENST00000288840 PRSS33Q8NF86 280 aa12.77□□□□□ -0.36
SMAD6-201ENST00000288840 C1orf159Q96HA4 380 aa12.77□□□□□ -0.36
SMAD6-201ENST00000288840 LINC00527Q9UJ94 153 aa12.77□□□□□ -0.36
SMAD6-201ENST00000288840 NIT1Q86X76 327 aa12.77□□□□□ -0.37
SMAD6-201ENST00000288840 OR4A5Q8NH83 315 aa12.77□□□□□ -0.37
SMAD6-201ENST00000288840 TSKUQ8WUA8 353 aa12.77□□□□□ -0.37
SMAD6-201ENST00000288840 SORL1Q92673 2214 aa12.77□□□□□ -0.37
SMAD6-201ENST00000288840 PIEZO1Q92508 2521 aa12.77□□□□□ -0.37
SMAD6-201ENST00000288840 PPIFP30405 207 aaKnown RBP12.77□□□□□ -0.37
SMAD6-201ENST00000288840 DPM3Q9P2X0 92 aa12.77□□□□□ -0.37
SMAD6-201ENST00000288840 AKAP13Q12802 2813 aa12.76□□□□□ -0.37
SMAD6-201ENST00000288840 LOC105371242A0A075B767 164 aa12.76□□□□□ -0.37
SMAD6-201ENST00000288840 PRSS46E5RG02 174 aa12.76□□□□□ -0.37
SMAD6-201ENST00000288840 ATP5IP56385 69 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms