RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 LMO7DNF2Z398 122 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 LINC00694P0DN24 101 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 DNAJC30Q96LL9 226 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 AGRNO00468 2067 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 WDFY3Q8IZQ1 3526 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 SNCGO76070 127 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 IFI27P40305 119 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-201ENST00000274071 CXCL12P48061 93 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 FXYD7P58549 80 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 LINC00322Q6ZN03 302 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-201ENST00000274071 C17orf82Q86X59 251 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-201ENST00000274071 OR1L8Q8NGR8 309 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 PIFOQ8TCI5 191 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 SLC25A33Q9BSK2 321 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 ASXL3Q9C0F0 2248 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 KLF13Q9Y2Y9 288 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-201ENST00000274071 NXPH1P58417 271 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 LINC00205P59089 165 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 SRYQ05066 204 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 Q6ZQT7 251 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 DLX4Q92988 240 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-201ENST00000274071 ZNF837Q96EG3 531 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-201ENST00000274071 HHLA3Q9XRX5 114 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 PCSK5Q92824 1860 aa7.43□□□□□ -1.22
PDGFC-201ENST00000274071 PRR30Q53SZ7 412 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-201ENST00000274071 MORN3Q6PF18 240 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-201ENST00000274071 OR9G1Q8NH87 305 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 NABP2Q9BQ15 211 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 FGF23Q9GZV9 251 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-201ENST00000274071 RPP21Q9H633 154 aaKnown RBP7.42□□□□□ -1.22
PDGFC-201ENST00000274071 WDFY4Q6ZS81 3184 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 SYNGR3O43761 229 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 GFRA3O60609 400 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 RPL7P18124 248 aaKnown RBP7.42□□□□□ -1.22
PDGFC-201ENST00000274071 COL8A1P27658 744 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 C16orf47Q6ZP98 133 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-201ENST00000274071 PPP1R27Q86WC6 154 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 SGK494Q96LW2 274 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 PRSS22Q9GZN4 317 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 MDFICQ9P1T7 246 aa7.42□□□□□ -1.22
PDGFC-201ENST00000274071 OR1C1Q15619 314 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 C10orf128Q5T292 105 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 Q6P435 159 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 RBPMS2Q6ZRY4 209 aaKnown RBP7.41□□□□□ -1.22
PDGFC-201ENST00000274071 CITED2Q99967 270 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-201ENST00000274071 FAM234AQ9H0X4 552 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 MOSP00540 346 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 EIF4EBP1Q13541 118 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-201ENST00000274071 Q6Q795 121 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 IFI27L1Q96BM0 104 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 LINC01587Q99440 93 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 UBTD1Q9HAC8 227 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 TMSB15BA0A087X1C1 80 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 PATE4P0C8F1 98 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 PSMB2P49721 201 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 FAM53AQ6NSI3 398 aaPredicted RBP7.41□□□□□ -1.22
PDGFC-201ENST00000274071 MOB3BQ86TA1 216 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 RITA1Q96K30 269 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 ZNF488Q96MN9 340 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 RASL11BQ9BPW5 248 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 TPPP3Q9BW30 176 aa7.41□□□□□ -1.22
PDGFC-201ENST00000274071 MRPL32Q9BYC8 188 aaKnown RBP7.41□□□□□ -1.22
PDGFC-201ENST00000274071 LOC389332A0A1B0GUA5 103 aa7.4□□□□□ -1.22
PDGFC-201ENST00000274071 PEX7O00628 323 aa7.4□□□□□ -1.22
PDGFC-201ENST00000274071 NDUFS7O75251 213 aa7.4□□□□□ -1.22
PDGFC-201ENST00000274071 FOXG1P55316 489 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-201ENST00000274071 ZFP2Q6ZN57 461 aa7.4□□□□□ -1.22
PDGFC-201ENST00000274071 FAM19A5Q7Z5A7 132 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-201ENST00000274071 MKXQ8IYA7 352 aa7.4□□□□□ -1.22
PDGFC-201ENST00000274071 CIARTQ8N365 385 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-201ENST00000274071 C1orf162Q8NEQ5 155 aaPredicted RBP7.4□□□□□ -1.22
PDGFC-201ENST00000274071 TMEM158Q8WZ71 300 aa7.4□□□□□ -1.22
PDGFC-201ENST00000274071 SIGLEC9Q9Y336 463 aa7.4□□□□□ -1.22
PDGFC-201ENST00000274071 CFAP54Q96N23 3096 aa7.4□□□□□ -1.22
PDGFC-201ENST00000274071 WI2-2373I1.2A0A1W2PRP0 233 aa7.4□□□□□ -1.23
PDGFC-201ENST00000274071 HAX1O00165 279 aa7.4□□□□□ -1.23
PDGFC-201ENST00000274071 KRTAP27-1Q3LI81 207 aa7.4□□□□□ -1.23
PDGFC-201ENST00000274071 FAM27BQ5VT28 67 aa7.4□□□□□ -1.23
PDGFC-201ENST00000274071 SLC25A45Q8N413 288 aa7.4□□□□□ -1.23
PDGFC-201ENST00000274071 RND1Q92730 232 aa7.4□□□□□ -1.23
PDGFC-201ENST00000274071 IGHV1OR21-1A0A087WYE8 117 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 SRRM4A7MD48 611 aaKnown RBP7.39□□□□□ -1.23
PDGFC-201ENST00000274071 TMEM150CB9EJG8 249 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 FCER1GP30273 86 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 TAL2Q16559 108 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 SFTA2Q6UW10 78 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 WFDC3Q8IUB2 231 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 COQ2Q96H96 371 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 KLF12Q9Y4X4 402 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 K7ESF4 209 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 P01737 135 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 SPINK2P20155 84 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 SUMO3P55854 103 aaPredicted RBP7.39□□□□□ -1.23
PDGFC-201ENST00000274071 CFHR1Q03591 330 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 CT83Q5H943 113 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 GTSCR1Q86UQ5 136 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 PLXDC1Q8IUK5 500 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 HIST1H4GQ99525 98 aa7.39□□□□□ -1.23
PDGFC-201ENST00000274071 ONECUT1Q9UBC0 465 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms