RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 A8MTW9 85 aa6.33□□□□□ -1.4
TPM3-201ENST00000271850 P0DMU3 169 aa6.33□□□□□ -1.4
TPM3-201ENST00000271850 FAM231AP0DMU4 169 aa6.33□□□□□ -1.4
TPM3-201ENST00000271850 FAM231CP0DMU5 169 aa6.33□□□□□ -1.4
TPM3-201ENST00000271850 EIF2B2P49770 351 aaKnown RBP6.33□□□□□ -1.4
TPM3-201ENST00000271850 AP2S1P53680 142 aaPredicted RBP6.33□□□□□ -1.4
TPM3-201ENST00000271850 SNRPD3P62318 126 aaKnown RBP6.33□□□□□ -1.4
TPM3-201ENST00000271850 SURF2Q15527 256 aaPredicted RBP6.33□□□□□ -1.4
TPM3-201ENST00000271850 MZT2AQ6P582 158 aa6.33□□□□□ -1.4
TPM3-201ENST00000271850 AMTNQ6UX39 209 aa6.33□□□□□ -1.4
TPM3-201ENST00000271850 LYZL2Q7Z4W2 148 aa6.33□□□□□ -1.4
TPM3-201ENST00000271850 OR51S1Q8NGJ8 323 aa6.33□□□□□ -1.4
TPM3-201ENST00000271850 NARS2Q96I59 477 aaKnown RBP6.33□□□□□ -1.4
TPM3-201ENST00000271850 IGHV3OR16-12A0A075B7B8 117 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 ANKRD20A5PA0PJZ0 165 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 PRSS46E5RG02 174 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 CRXO43186 299 aaPredicted RBP6.32□□□□□ -1.4
TPM3-201ENST00000271850 PITX3O75364 302 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 SPART-AS1P0CW21 52 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 SULT1A3P0DMM9 295 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 SULT1A4P0DMN0 295 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 PAX9P55771 341 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 SSBP1Q04837 148 aaKnown RBP6.32□□□□□ -1.4
TPM3-201ENST00000271850 TMEM182Q6ZP80 229 aaPredicted RBP6.32□□□□□ -1.4
TPM3-201ENST00000271850 FOXI2Q6ZQN5 318 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 LGI3Q8N145 548 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 DTD1Q8TEA8 209 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 AP3S1Q92572 193 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 IL22RA2Q969J5 263 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 CLUHP3Q96NS8 147 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 PBDC1Q9BVG4 233 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 C1QTNF4Q9BXJ3 329 aa6.32□□□□□ -1.4
TPM3-201ENST00000271850 C14orf166Q9Y224 244 aaKnown RBP6.32□□□□□ -1.4
TPM3-201ENST00000271850 A0A0J9YX75 114 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 PLAC8L1A1L4L8 177 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 CTDSPLO15194 276 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 GSTZ1O43708 216 aaPredicted RBP6.31□□□□□ -1.4
TPM3-201ENST00000271850 SCGB2A1O75556 95 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 IFNA10P01566 189 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 AKAIN1P0CW23 69 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 ALDH3B2P48448 385 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 PSMB3P49720 205 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 LYZP61626 148 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 NUTF2P61970 127 aaKnown RBP6.31□□□□□ -1.4
TPM3-201ENST00000271850 OR2F1Q13607 317 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 KLF9Q13886 244 aaPredicted RBP6.31□□□□□ -1.4
TPM3-201ENST00000271850 SMCO1Q147U7 214 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 FAM78BQ5VT40 261 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 OR8G2PQ6IF36 304 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 ETFRF1Q6IPR1 90 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 TMEM88Q6PEY1 159 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 LINC00052Q96N35 136 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 SOSTQ9BQB4 213 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 NIPSNAP3BQ9BS92 247 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 SLC25A32Q9H2D1 315 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 YTHDF2Q9Y5A9 579 aaKnown RBP6.31□□□□□ -1.4
TPM3-201ENST00000271850 RFNGQ9Y644 331 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 U3KQ87 197 aa6.31□□□□□ -1.4
TPM3-201ENST00000271850 TRAV8-2A0A0B4J237 113 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 A0A0B4J2A0 478 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 SMIM9A6NGZ8 99 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 DISC1C4P0D8 188 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 PRB4P10163 310 aaPredicted RBP6.3□□□□□ -1.4
TPM3-201ENST00000271850 GATA2P23769 480 aaPredicted RBP6.3□□□□□ -1.4
TPM3-201ENST00000271850 CCR6P51684 374 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 LINC00310P59036 64 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 PSG9Q00887 426 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 OXA1LQ15070 435 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 CLVS1Q8IUQ0 354 aaPredicted RBP6.3□□□□□ -1.4
TPM3-201ENST00000271850 THAP8Q8NA92 274 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 OR4B1Q8NGF8 309 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 DYNC2LI1Q8TCX1 351 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 TRGV9Q99603 122 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 SHPKQ9UHJ6 478 aa6.3□□□□□ -1.4
TPM3-201ENST00000271850 LOC102723971A0A1B0GUV8 181 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 TMEM189A5PLL7 270 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 ZFP92A6NM28 416 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 RGS5O15539 181 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 IAPPP10997 89 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 HTN3P15516 51 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 GPX4P36969 197 aaPredicted RBP6.29□□□□□ -1.4
TPM3-201ENST00000271850 MRPS10P82664 201 aaKnown RBP6.29□□□□□ -1.4
TPM3-201ENST00000271850 IL18Q14116 193 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 C1orf194Q5T5A4 169 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 C15orf40Q8WUR7 153 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 TRIM63Q969Q1 353 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 FAM210BQ96KR6 192 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 PRRT1Q99946 306 aa6.29□□□□□ -1.4
TPM3-201ENST00000271850 M0R2Z0 102 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 ISLRO14498 428 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 AKR1C4P17516 323 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 AZU1P20160 251 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 FCN2Q15485 313 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 RNF212Q495C1 297 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 RNF182Q8N6D2 247 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 DIRAS2Q96HU8 199 aa6.28□□□□□ -1.4
TPM3-201ENST00000271850 SLC35E1Q96K37 410 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms