RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TRGC2P03986 189 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 COL8A1P27658 744 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 SNRPEP62304 92 aaKnown RBP13□□□□□ -0.33
CCDC40-201ENST00000269318 OR10G8Q8NGN5 311 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 VN1R17PQ8TDU5 208 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 TXN2Q99757 166 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 CDC42EP3Q9UKI2 254 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 ZFHX3Q15911 3703 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 CELSR1Q9NYQ6 3014 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 TRBV9A0A0B4J1U6 114 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 G3V318 75 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 IGHV3-23P01764 117 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 TAS2R60P59551 318 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 USF2Q15853 346 aaPredicted RBP13□□□□□ -0.33
CCDC40-201ENST00000269318 LINC00479Q96M42 142 aa13□□□□□ -0.33
CCDC40-201ENST00000269318 CTSGP08311 255 aa12.99□□□□□ -0.33
CCDC40-201ENST00000269318 FOXL1Q12952 345 aa12.99□□□□□ -0.33
CCDC40-201ENST00000269318 LINC01356Q8N9X3 169 aa12.99□□□□□ -0.33
CCDC40-201ENST00000269318 SRD5A3Q9H8P0 318 aa12.99□□□□□ -0.33
CCDC40-201ENST00000269318 A0A1W2PPQ1 181 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 GCGP01275 180 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 S100A6P06703 90 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H1EP10412 219 aaKnown RBP12.98□□□□□ -0.33
CCDC40-201ENST00000269318 OR5I1Q13606 314 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 C19orf54Q5BKX5 351 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 KCNIP4Q6PIL6 250 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 BCL6BQ8N143 479 aaPredicted RBP12.98□□□□□ -0.33
CCDC40-201ENST00000269318 ZNF586Q9NXT0 402 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 EPDR1Q9UM22 224 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 PGPA6NDG6 321 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 OR2T8A6NH00 312 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 TYMSP04818 313 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 CNN1P51911 297 aaKnown RBP12.98□□□□□ -0.33
CCDC40-201ENST00000269318 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
CCDC40-201ENST00000269318 FAM3BP58499 235 aaPredicted RBP12.98□□□□□ -0.33
CCDC40-201ENST00000269318 GNG5P63218 68 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 C15orf32Q32M92 178 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 ZNF502Q8TBZ5 544 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 ZNF414Q96IQ9 312 aa12.98□□□□□ -0.33
CCDC40-201ENST00000269318 A6NDX4 124 aa12.97□□□□□ -0.33
CCDC40-201ENST00000269318 H3BTX0 84 aa12.97□□□□□ -0.33
CCDC40-201ENST00000269318 UBE2CO00762 179 aa12.97□□□□□ -0.33
CCDC40-201ENST00000269318 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
CCDC40-201ENST00000269318 ADMP35318 185 aa12.97□□□□□ -0.33
CCDC40-201ENST00000269318 RHOGP84095 191 aa12.97□□□□□ -0.33
CCDC40-201ENST00000269318 CHRDL1Q9BU40 450 aa12.97□□□□□ -0.33
CCDC40-201ENST00000269318 Q9H3A6 140 aa12.97□□□□□ -0.33
CCDC40-201ENST00000269318 H3BUX3 64 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 AP4M1O00189 453 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BKO60814 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 SLC25A5P05141 298 aaKnown RBP12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BJP06899 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 IGLC2P0DOY2 106 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BOP23527 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BBP33778 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BDP58876 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BCP62807 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 KLF12Q9Y4X4 402 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 V9GYV3 84 aa12.96□□□□□ -0.33
CCDC40-201ENST00000269318 ZNF98A6NK75 572 aa12.96□□□□□ -0.34
CCDC40-201ENST00000269318 PPP5D1E7EU14 171 aa12.96□□□□□ -0.34
CCDC40-201ENST00000269318 ISLRO14498 428 aa12.96□□□□□ -0.34
CCDC40-201ENST00000269318 ERVFC1-1P60608 527 aa12.96□□□□□ -0.34
CCDC40-201ENST00000269318 TMEM183BQ1AE95 376 aa12.96□□□□□ -0.34
CCDC40-201ENST00000269318 BPIFA4PQ86YQ2 179 aa12.96□□□□□ -0.34
CCDC40-201ENST00000269318 C5orf17Q8NAS9 161 aa12.96□□□□□ -0.34
CCDC40-201ENST00000269318 FRZBQ92765 325 aa12.96□□□□□ -0.34
CCDC40-201ENST00000269318 BEX4Q9NWD9 120 aaPredicted RBP12.96□□□□□ -0.34
CCDC40-201ENST00000269318 MAP1AP78559 2803 aaPredicted RBP12.95□□□□□ -0.34
CCDC40-201ENST00000269318 TRAV34A0A0B4J273 112 aa12.95□□□□□ -0.34
CCDC40-201ENST00000269318 SLC17A3O00476 420 aa12.95□□□□□ -0.34
CCDC40-201ENST00000269318 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
CCDC40-201ENST00000269318 LOXL1Q08397 574 aaPredicted RBP12.95□□□□□ -0.34
CCDC40-201ENST00000269318 ATG101Q9BSB4 218 aa12.95□□□□□ -0.34
CCDC40-201ENST00000269318 OTORQ9NRC9 128 aa12.95□□□□□ -0.34
CCDC40-201ENST00000269318 OSTCQ9NRP0 149 aa12.95□□□□□ -0.34
CCDC40-201ENST00000269318 IL36BQ9NZH7 164 aa12.95□□□□□ -0.34
CCDC40-201ENST00000269318 ANKRD17O75179 2603 aaKnown RBP12.94□□□□□ -0.34
CCDC40-201ENST00000269318 TRBV19A0A075B6N1 114 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 TRAV41A0A0B4J266 112 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 FABP9Q0Z7S8 132 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 LY6EQ16553 131 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 DEFB113Q30KQ7 82 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.94□□□□□ -0.344e-7■■■■□ 19.8
CCDC40-201ENST00000269318 TRGC1P0CF51 173 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 S100A7AQ86SG5 101 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 LRRC75A-AS1Q8N1F1 130 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 RNASE7Q9H1E1 156 aaKnown RBP12.94□□□□□ -0.34
CCDC40-201ENST00000269318 RNF24Q9Y225 148 aa12.94□□□□□ -0.34
CCDC40-201ENST00000269318 J3QLI3 93 aa12.93□□□□□ -0.34
CCDC40-201ENST00000269318 TCRAP04437 139 aa12.93□□□□□ -0.34
CCDC40-201ENST00000269318 IGF1P05019 195 aa12.93□□□□□ -0.34
CCDC40-201ENST00000269318 GPR183P32249 361 aa12.93□□□□□ -0.34
CCDC40-201ENST00000269318 BAGE2Q86Y30 109 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms