RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ANAPC10Q9UM13 185 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 LOC107984156A0A0G2JMH3 177 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 ARL17AQ8IVW1 177 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 SLC25A39Q9BZJ4 359 aaPredicted RBP11.42□□□□□ -0.58
CDH3-201ENST00000264012 DOCK10Q96BY6 2186 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 ATP5LO75964 103 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 ZNF124Q15973 351 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 PIP4P1Q86T03 277 aa11.42□□□□□ -0.58
CDH3-201ENST00000264012 IGKV3OR2-268A0A0C4DH90 116 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 ITGB1BP1O14713 200 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 LDLRAD2Q5SZI1 272 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 WDR86Q86TI4 376 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 BPESC1Q9GZL8 116 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 PRB4P10163 310 aaPredicted RBP11.41□□□□□ -0.58
CDH3-201ENST00000264012 TMEM155Q4W5P6 130 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 FBLN7Q53RD9 439 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 LINC01587Q99440 93 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 H3BUX3 64 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 GATA4P43694 442 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 DPH3Q96FX2 82 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 DERL1Q9BUN8 251 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 TRAV8-6A0A0B4J262 113 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 RPL15P61313 204 aaKnown RBP11.41□□□□□ -0.58
CDH3-201ENST00000264012 TSKUQ8WUA8 353 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 SCGB3A1Q96QR1 104 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 ZNRD1Q9P1U0 126 aa11.41□□□□□ -0.58
CDH3-201ENST00000264012 ERASQ7Z444 233 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 LINC01551Q86U37 167 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 NUP210Q8TEM1 1887 aaPredicted RBP11.4□□□□□ -0.58
CDH3-201ENST00000264012 CD7P09564 240 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 RNASE2P10153 161 aaKnown RBP11.4□□□□□ -0.58
CDH3-201ENST00000264012 PRTN3P24158 256 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 C3orf36Q3SXR2 165 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 TMEM170BQ5T4T1 132 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 DMRTA1Q5VZB9 504 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 EXOC3-AS1Q8N2X6 119 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 C14orf144Q96I85 54 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 TRAV21A0A0B4J279 112 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 COX6CP09669 75 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
CDH3-201ENST00000264012 PSMB11A5LHX3 300 aa11.4□□□□□ -0.59
CDH3-201ENST00000264012 ADCYAP1P18509 176 aa11.4□□□□□ -0.59
CDH3-201ENST00000264012 PPIFP30405 207 aaKnown RBP11.4□□□□□ -0.59
CDH3-201ENST00000264012 ERVK11-1P61568 191 aa11.4□□□□□ -0.59
CDH3-201ENST00000264012 ZGRF1Q86YA3 2104 aa11.4□□□□□ -0.59
CDH3-201ENST00000264012 PLP1P60201 277 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 SIGLEC15Q6ZMC9 328 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 NUDT10Q8NFP7 164 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 NUDT11Q96G61 164 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 CXCL1P09341 107 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 BEND2Q8NDZ0 799 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 FOXC2Q99958 501 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 PRDM13Q9H4Q3 707 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 FAM215AQ9Y5M1 114 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 MLANAQ16655 118 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 C11orf44Q8N8P7 122 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 Q8TCH9 128 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 GNB1LQ9BYB4 327 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 LIME1Q9H400 295 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 NPIPB5A8MRT5 1133 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 TMEM50AO95807 157 aa11.39□□□□□ -0.59
CDH3-201ENST00000264012 PEF1Q9UBV8 284 aaKnown RBP11.39□□□□□ -0.59
CDH3-201ENST00000264012 DUSP14O95147 198 aaKnown RBP11.38□□□□□ -0.59
CDH3-201ENST00000264012 IGLV1-44P01699 117 aa11.38□□□□□ -0.59
CDH3-201ENST00000264012 CIRBPQ14011 172 aaKnown RBP11.38□□□□□ -0.59
CDH3-201ENST00000264012 SRD5A1P18405 259 aa11.38□□□□□ -0.59
CDH3-201ENST00000264012 MALRD1Q5VYJ5 2156 aa11.38□□□□□ -0.59
CDH3-201ENST00000264012 DENND4CQ5VZ89 1909 aa11.38□□□□□ -0.59
CDH3-201ENST00000264012 TCRAP04437 139 aa11.38□□□□□ -0.59
CDH3-201ENST00000264012 SUMO2P61956 95 aaKnown RBP11.38□□□□□ -0.59
CDH3-201ENST00000264012 PYY3Q5JQD4 70 aa11.38□□□□□ -0.59
CDH3-201ENST00000264012 YLPM1P49750 1951 aaKnown RBP11.38□□□□□ -0.59
CDH3-201ENST00000264012 IGKV2-40A0A087WW87 121 aaPredicted RBP11.38□□□□□ -0.59
CDH3-201ENST00000264012 IGKV2D-40P01614 121 aaPredicted RBP11.38□□□□□ -0.59
CDH3-201ENST00000264012 SMIM12Q96EX1 92 aa11.38□□□□□ -0.59
CDH3-201ENST00000264012 AMBPP02760 352 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 CD33P20138 364 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 SPSB3Q6PJ21 355 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 ZNF256Q9Y2P7 627 aaPredicted RBP11.37□□□□□ -0.59
CDH3-201ENST00000264012 IGLV3-1P01715 115 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 ACACBO00763 2458 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 OVOL1O14753 267 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 SAA4P35542 130 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 LEPP41159 167 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 LAMTOR2Q9Y2Q5 125 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 NBL1P41271 181 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 ARL6IP6Q8N6S5 226 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 ST6GALNAC6Q969X2 333 aa11.37□□□□□ -0.59
CDH3-201ENST00000264012 FOXL1Q12952 345 aa11.36□□□□□ -0.59
CDH3-201ENST00000264012 DUX4L9Q6RFH8 374 aaPredicted RBP11.36□□□□□ -0.59
CDH3-201ENST00000264012 A0A1W2PPI3 338 aa11.36□□□□□ -0.59
CDH3-201ENST00000264012 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.36□□□□□ -0.59
CDH3-201ENST00000264012 SNAI2O43623 268 aa11.36□□□□□ -0.59
CDH3-201ENST00000264012 TMEM262E9PQX1 116 aa11.36□□□□□ -0.59
CDH3-201ENST00000264012 GZMBP10144 247 aa11.36□□□□□ -0.59
CDH3-201ENST00000264012 OR10J3Q5JRS4 329 aa11.36□□□□□ -0.59
CDH3-201ENST00000264012 PSMG4Q5JS54 123 aa11.36□□□□□ -0.59
CDH3-201ENST00000264012 CYB5R2Q6BCY4 276 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms