RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 VWC2LB2RUY7 222 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 OTOGLQ3ZCN5 2332 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 DUTP33316 252 aaKnown RBP14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 LHFPL4Q7Z7J7 247 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 F8WEM9 126 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 TBX6O95947 436 aaPredicted RBP14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 COLCA1Q6ZS62 124 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 TRAV5A0A0B4J249 113 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 GFRA3O60609 400 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 RSPO4Q2I0M5 234 aaPredicted RBP14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 SIGLEC15Q6ZMC9 328 aa14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 ZNF48Q96MX3 618 aaPredicted RBP14.53□□□□□ -0.08
NOTCH3-201ENST00000263388 PRR32B1ATL7 298 aa14.52□□□□□ -0.08
NOTCH3-201ENST00000263388 SLC25A48Q6ZT89 311 aaKnown RBP14.52□□□□□ -0.08
NOTCH3-201ENST00000263388 IGLV3-12A0A075B6K2 115 aa14.52□□□□□ -0.08
NOTCH3-201ENST00000263388 LY6G6FQ5SQ64 297 aa14.52□□□□□ -0.08
NOTCH3-201ENST00000263388 SPANXDQ9BXN6 97 aa14.52□□□□□ -0.08
NOTCH3-201ENST00000263388 TRGV11A0A075B6L2 103 aa14.52□□□□□ -0.08
NOTCH3-201ENST00000263388 ZNF124Q15973 351 aa14.52□□□□□ -0.08
NOTCH3-201ENST00000263388 JMJD8Q96S16 334 aa14.52□□□□□ -0.08
NOTCH3-201ENST00000263388 PTPN13Q12923 2485 aa14.52□□□□□ -0.09
NOTCH3-201ENST00000263388 IGKV1D-13A0A0B4J2D9 117 aa14.52□□□□□ -0.09
NOTCH3-201ENST00000263388 IGKV1-13P0DP09 117 aa14.52□□□□□ -0.09
NOTCH3-201ENST00000263388 HIST1H2BLQ99880 126 aa14.52□□□□□ -0.09
NOTCH3-201ENST00000263388 EPOPA6NHQ4 379 aa14.52□□□□□ -0.09
NOTCH3-201ENST00000263388 C1QTNF9P0C862 333 aa14.52□□□□□ -0.09
NOTCH3-201ENST00000263388 EVI2AP22794 236 aa14.52□□□□□ -0.09
NOTCH3-201ENST00000263388 TRAV1-1A0A0B4J248 108 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 FAM166AQ6J272 317 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 ASCL4Q6XD76 172 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 PLPPR1Q8TBJ4 325 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 IFI27L1Q96BM0 104 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 RHOGP84095 191 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 FAM201AQ5SY85 155 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 ADARB2-AS1A8MUL3 147 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 LEPROTO15243 131 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 A0A1B0GW64 132 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 FOXL1Q12952 345 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 CSRP2Q16527 193 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 TEX38Q6PEX7 206 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 OCC1Q8TAD7 63 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 ZNF837Q96EG3 531 aaPredicted RBP14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 GATD1Q8NB37 220 aa14.51□□□□□ -0.09
NOTCH3-201ENST00000263388 TGFBR3LH3BV60 316 aa14.5□□□□□ -0.09
NOTCH3-201ENST00000263388 CT83Q5H943 113 aa14.5□□□□□ -0.09
NOTCH3-201ENST00000263388 PSG8Q9UQ74 426 aa14.5□□□□□ -0.09
NOTCH3-201ENST00000263388 GLMPQ8WWB7 406 aa14.5□□□□□ -0.09
NOTCH3-201ENST00000263388 MRPL52Q86TS9 123 aaKnown RBP14.5□□□□□ -0.09
NOTCH3-201ENST00000263388 LINC00158P58513 81 aa14.5□□□□□ -0.09
NOTCH3-201ENST00000263388 SMAD7O15105 426 aaKnown RBP14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 CD5P06127 495 aa14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 IGHV3OR16-8A0A075B7F1 116 aa14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 SRSF3P84103 164 aaKnown RBP14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 PAX8Q06710 450 aa14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 PRSS22Q9GZN4 317 aa14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 FGF16O43320 207 aa14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 RPL32P62910 135 aaKnown RBP14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 KLF12Q9Y4X4 402 aa14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 TRBV24-1A0A075B6N3 115 aa14.49□□□□□ -0.09
NOTCH3-201ENST00000263388 OVOL1O14753 267 aa14.48□□□□□ -0.09
NOTCH3-201ENST00000263388 ID3Q02535 119 aa14.48□□□□□ -0.09
NOTCH3-201ENST00000263388 DEPPQ9NTK1 212 aa14.48□□□□□ -0.09
NOTCH3-201ENST00000263388 LYZL4Q96KX0 146 aa14.48□□□□□ -0.09
NOTCH3-201ENST00000263388 TET2Q6N021 2002 aaPredicted RBP14.48□□□□□ -0.09
NOTCH3-201ENST00000263388 C2orf82Q6UX34 121 aa14.48□□□□□ -0.09
NOTCH3-201ENST00000263388 C9orf106Q8NAJ2 232 aa14.48□□□□□ -0.09
NOTCH3-201ENST00000263388 PYYP10082 97 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 ABHD17AQ96GS6 310 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 FAM208BQ5VWN6 2430 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 TRGV4A0A0C4DH28 118 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 OCIAD2Q56VL3 154 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 IGKV1-9A0A0C4DH69 117 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 CCL3L1P16619 93 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 A0A0A6YYD4 124 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 TNFSF13O75888 250 aa14.47□□□□□ -0.09
NOTCH3-201ENST00000263388 MBNL3Q9NUK0 354 aaKnown RBP14.46□□□□□ -0.09
NOTCH3-201ENST00000263388 PLEKHB2Q96CS7 222 aa14.46□□□□□ -0.09
NOTCH3-201ENST00000263388 MRPL14Q6P1L8 145 aaKnown RBP14.46□□□□□ -0.09
NOTCH3-201ENST00000263388 OR9G9P0C7N8 305 aa14.46□□□□□ -0.1
NOTCH3-201ENST00000263388 PRADC1Q9BSG0 188 aa14.46□□□□□ -0.1
NOTCH3-201ENST00000263388 FAM90A2PQ658T7 463 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 CSPG4Q6UVK1 2322 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 IGHV3-11P01762 117 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 HTN3P15516 51 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 TRGV9Q99603 122 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 TRBV7-1A0A0A6YYK4 115 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 HIST3H2BBQ8N257 126 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 GZMBP10144 247 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 AGMATQ9BSE5 352 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 PAX4O43316 350 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 SLC25A39Q9BZJ4 359 aaPredicted RBP14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 AGRNO00468 2067 aa14.45□□□□□ -0.1
NOTCH3-201ENST00000263388 NPIPB5A8MRT5 1133 aa14.44□□□□□ -0.1
NOTCH3-201ENST00000263388 RBMY1FQ15415 496 aaKnown RBP14.44□□□□□ -0.1
NOTCH3-201ENST00000263388 A0A1W2PRX2 142 aa14.44□□□□□ -0.1
NOTCH3-201ENST00000263388 CMC4P56277 68 aaPredicted RBP14.44□□□□□ -0.1
NOTCH3-201ENST00000263388 LOC102723996A0A087X1L8 192 aa14.44□□□□□ -0.1
NOTCH3-201ENST00000263388 GGTLC1Q9BX51 225 aa14.44□□□□□ -0.1
NOTCH3-201ENST00000263388 WNT2P09544 360 aa14.44□□□□□ -0.1
NOTCH3-201ENST00000263388 ACTL10Q5JWF8 245 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms