RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 KLF17Q5JT82 389 aaPredicted RBP10.44□□□□□ -0.74
SNX1-201ENST00000261889 FXYD5Q96DB9 178 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 TMEM70Q9BUB7 260 aa10.44□□□□□ -0.74
SNX1-201ENST00000261889 NCOR2Q9Y618 2525 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 SERTM2A0A1B0GWG4 89 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 SAP30O75446 220 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 TXNDC17Q9BRA2 123 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 CREBBPQ92793 2442 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 IGKV1D-37A0A075B6S9 117 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 M0R3E3 92 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 CHD8Q9HCK8 2581 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 A0A1W2PPI3 338 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 IGLC7A0M8Q6 106 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 CHEK1O14757 476 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 TNFSF4P23510 183 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 ERHP84090 104 aaKnown RBP10.43□□□□□ -0.74
SNX1-201ENST00000261889 TMEM249Q2WGJ8 235 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 TTTY13Q9BZ97 58 aa10.43□□□□□ -0.74
SNX1-201ENST00000261889 IGHV2-26A0A0B4J1V2 119 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 P01737 135 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 CHRDL1Q9BU40 450 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 RNF7Q9UBF6 113 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 SLC25A15Q9Y619 301 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 TRBV9A0A0B4J1U6 114 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 SMKR1H3BMG3 65 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 ZNF207O43670 478 aaKnown RBP10.42□□□□□ -0.74
SNX1-201ENST00000261889 IGHV3-23P01764 117 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 RBP4P02753 201 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 COL8A1P27658 744 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 SLC25A10Q9UBX3 287 aaPredicted RBP10.42□□□□□ -0.74
SNX1-201ENST00000261889 F11RQ9Y624 299 aaKnown RBP10.42□□□□□ -0.74
SNX1-201ENST00000261889 TRAV8-6A0A0B4J262 113 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 K7EP13 123 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 GOSR1O95249 250 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 NBEAP1P0C6P0 100 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 CGB3P0DN86 165 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 CGB7P0DN87 165 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 COX7A1P24310 79 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 FAM120AOSQ5T036 256 aa10.42□□□□□ -0.74
SNX1-201ENST00000261889 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
SNX1-201ENST00000261889 FBLL1A6NHQ2 334 aaKnown RBP10.41□□□□□ -0.74
SNX1-201ENST00000261889 ARMS2P0C7Q2 107 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 CFHR2P36980 270 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 EPDR1Q9UM22 224 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 MSRB2Q9Y3D2 182 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 PSMB11A5LHX3 300 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 H0YJW9 148 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 SYS1-DBNDD2H3BUS1 97 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 HTR1DP28221 377 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 AARDQ4LEZ3 155 aa10.41□□□□□ -0.74
SNX1-201ENST00000261889 SRSF12Q8WXF0 261 aaKnown RBP10.41□□□□□ -0.74
SNX1-201ENST00000261889 GRAMD2BQ96HH9 432 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 LY6HO94772 140 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 HBBP68871 147 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 OR1L8Q8NGR8 309 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 FAM222BQ8WU58 562 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 Q9H3A6 140 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 CSMD2Q7Z408 3487 aa10.4□□□□□ -0.74
SNX1-201ENST00000261889 TMEM11P17152 192 aa10.4□□□□□ -0.75
SNX1-201ENST00000261889 TMEM200BQ69YZ2 307 aa10.4□□□□□ -0.75
SNX1-201ENST00000261889 SARAFQ96BY9 339 aa10.4□□□□□ -0.75
SNX1-201ENST00000261889 NDUFA4L2Q9NRX3 87 aa10.4□□□□□ -0.75
SNX1-201ENST00000261889 MBNL2Q5VZF2 373 aaKnown RBP10.39□□□□□ -0.75
SNX1-201ENST00000261889 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
SNX1-201ENST00000261889 C18orf15Q96N68 181 aa10.39□□□□□ -0.75
SNX1-201ENST00000261889 HIST1H1EP10412 219 aaKnown RBP10.39□□□□□ -0.75
SNX1-201ENST00000261889 C2orf83Q53S99 150 aa10.39□□□□□ -0.75
SNX1-201ENST00000261889 SLC25A48Q6ZT89 311 aaKnown RBP10.39□□□□□ -0.75
SNX1-201ENST00000261889 OR1L4Q8NGR5 311 aa10.39□□□□□ -0.75
SNX1-201ENST00000261889 ORAOV1Q8WV07 137 aa10.39□□□□□ -0.75
SNX1-201ENST00000261889 RPP21Q9H633 154 aaKnown RBP10.39□□□□□ -0.75
SNX1-201ENST00000261889 TRAV9-1A0A075B6T8 112 aa10.39□□□□□ -0.75
SNX1-201ENST00000261889 IGLV1-44P01699 117 aa10.39□□□□□ -0.75
SNX1-201ENST00000261889 APOHP02749 345 aaPredicted RBP10.39□□□□□ -0.75
SNX1-201ENST00000261889 PSG9Q00887 426 aa10.39□□□□□ -0.75
SNX1-201ENST00000261889 BVES-AS1Q5T3Y7 98 aa10.38□□□□□ -0.75
SNX1-201ENST00000261889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.38□□□□□ -0.759e-7■■■■□ 23.5
SNX1-201ENST00000261889 TMEM213A2RRL7 107 aa10.38□□□□□ -0.75
SNX1-201ENST00000261889 KIR2DS2P43631 304 aa10.38□□□□□ -0.75
SNX1-201ENST00000261889 ARF6P62330 175 aa10.38□□□□□ -0.75
SNX1-201ENST00000261889 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
SNX1-201ENST00000261889 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
SNX1-201ENST00000261889 IGHV1-69-2A0A0G2JMI3 117 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 TCRBV4S1A1TA0A5B7 111 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 LHBP01229 141 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 PPIFP30405 207 aaKnown RBP10.37□□□□□ -0.75
SNX1-201ENST00000261889 SLC25A34Q6PIV7 304 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 TMEM75Q8N9X5 138 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 IGHV3OR16-13A0A075B7E8 117 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 IGHV3-74A0A0B4J1X5 117 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 FAM90A9PA6NNJ1 464 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 J3QW42 95 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 PLGLAQ15195 96 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 C8orf49Q96NF6 230 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 GPR82Q96P67 336 aa10.37□□□□□ -0.75
SNX1-201ENST00000261889 HRNRQ86YZ3 2850 aaPredicted RBP10.36□□□□□ -0.75
SNX1-201ENST00000261889 IGHV2-70DA0A0C4DH43 119 aa10.36□□□□□ -0.75
SNX1-201ENST00000261889 HSBP1L1C9JCN9 74 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms