RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 BOKQ9UMX3 212 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-201ENST00000261443 ICE1Q9Y2F5 2266 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 COL27A1Q8IZC6 1860 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-201ENST00000261443 LOC389332A0A1B0GUA5 103 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 DLL1O00548 723 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 NKX2-8O15522 239 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 LTAP01374 205 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 PRDX2P32119 198 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 MPV17P39210 176 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 IFI27P40305 119 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 CYB561P49447 251 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 ATP5IP56385 69 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 LINC00305Q7Z4B0 112 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 RBMXL3Q8N7X1 1067 aaKnown RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 OR5AN1Q8NGI8 311 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 FAM222BQ8WU58 562 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 MRAP2Q96G30 205 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 SPAG8Q99932 426 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 CXXC4Q9H2H0 198 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 GEMIN7Q9H840 131 aaKnown RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 PCSK5Q92824 1860 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 MGAQ8IWI9 3026 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 ROS1P08922 2347 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 A0A1B0GUT8 65 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 K7ERJ3 54 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 UPK2O00526 184 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 SAA2P0DJI9 122 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 FOLR3P41439 243 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 FXYD2P54710 66 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 LOXL1Q08397 574 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 UTF1Q5T230 341 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 SH2D6Q7Z4S9 175 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 CACNG8Q8WXS5 425 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 ZNF414Q96IQ9 312 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 PI4KAP42356 2102 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 ZNF318Q5VUA4 2279 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 PRR14LQ5THK1 2151 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 A0A096LNJ9 63 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 LY6G6EA0A0G2JKS1 128 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 IGHV3-48P01763 117 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 ARMS2P0C7Q2 107 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 RIGQ13278 110 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 ETDBQ3ZM63 59 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 CT45A1Q5HYN5 189 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 SPINK14Q6IE38 97 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 CT45A3Q8NHU0 189 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 KLF14Q8TD94 323 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-201ENST00000261443 U3KQA8 63 aa5.82□□□□□ -1.48
CSDE1-201ENST00000261443 TTC28Q96AY4 2481 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 TANC2Q9HCD6 1990 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 POLEQ07864 2286 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 Q0VFX4 171 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 C3AR1Q16581 482 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 CIARTQ8N365 385 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-201ENST00000261443 GCSAMQ8N6F7 178 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 NPIPB3Q92617 1050 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 FER1L6-AS2Q96M78 137 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 C18orf15Q96N68 181 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 KBTBD11-OT1A0A1B0GTJ5 212 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 A0A1W2PRD5 423 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 A0A1W2PRF3 423 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 A0A1W2PRM7 423 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 NPIPB6E9PJ23 425 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 FSTL3O95633 263 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 CT45A6P0DMU7 189 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 CT45A5P0DMU8 189 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 CT45A7P0DMV0 189 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 ORM2P19652 201 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 FXYD7P58549 80 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 IL11RAQ14626 422 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 POU2AF1Q16633 256 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 ABHD17BQ5VST6 288 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 SLC25A48Q6ZT89 311 aaKnown RBP5.81□□□□□ -1.48
CSDE1-201ENST00000261443 ARPC1AQ92747 370 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 NHP2Q9NX24 153 aaKnown RBP5.81□□□□□ -1.48
CSDE1-201ENST00000261443 PCNX2A6NKB5 2137 aa5.81□□□□□ -1.48
CSDE1-201ENST00000261443 TCRBV4S1A1TA0A5B7 111 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 PRR33A8MZF0 331 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 H3BTX0 84 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 SLC25A17O43808 307 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 TIMM8AO60220 97 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-201ENST00000261443 TCRAP04437 139 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 ERHP84090 104 aaKnown RBP5.8□□□□□ -1.48
CSDE1-201ENST00000261443 ATP5G2Q06055 141 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 SRSF12Q8WXF0 261 aaKnown RBP5.8□□□□□ -1.48
CSDE1-201ENST00000261443 TPPP3Q9BW30 176 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 CALYQ9NYX4 217 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 SIGLEC8Q9NYZ4 499 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 TPRP12270 2363 aaKnown RBP5.8□□□□□ -1.48
CSDE1-201ENST00000261443 TRAV8-1A0A0A6YYK1 113 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 H3BMG7 143 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 IGKV1-16P04430 117 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 CFHR2P36980 270 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 MTURNQ8N3F0 131 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-201ENST00000261443 PPP1R35Q8TAP8 253 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 IFI27L1Q96BM0 104 aa5.8□□□□□ -1.48
CSDE1-201ENST00000261443 FLYWCH2Q96CP2 140 aaKnown RBP5.8□□□□□ -1.48
CSDE1-201ENST00000261443 B4GALT7Q9UBV7 327 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms