RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 OR8B3Q8NGG8 313 aa13.03□□□□□ -0.32
SNCAIP-202ENST00000261368 OR5AN1Q8NGI8 311 aa13.03□□□□□ -0.32
SNCAIP-202ENST00000261368 SRSF12Q8WXF0 261 aaKnown RBP13.03□□□□□ -0.32
SNCAIP-202ENST00000261368 ALKBH7Q9BT30 221 aaPredicted RBP13.03□□□□□ -0.32
SNCAIP-202ENST00000261368 CA7P43166 264 aa13.02□□□□□ -0.32
SNCAIP-202ENST00000261368 IGLL1P15814 213 aa13.02□□□□□ -0.33
SNCAIP-202ENST00000261368 GFRALQ6UXV0 394 aa13.02□□□□□ -0.33
SNCAIP-202ENST00000261368 FAM169BQ8N8A8 192 aa13.02□□□□□ -0.33
SNCAIP-202ENST00000261368 RASL11BQ9BPW5 248 aa13.02□□□□□ -0.33
SNCAIP-202ENST00000261368 LOC389332A0A1B0GUA5 103 aa13.02□□□□□ -0.33
SNCAIP-202ENST00000261368 C5orf17Q8NAS9 161 aa13.02□□□□□ -0.33
SNCAIP-202ENST00000261368 ZNF738Q8NE65 137 aa13.02□□□□□ -0.33
SNCAIP-202ENST00000261368 MEF2CQ06413 473 aaPredicted RBP13.01□□□□□ -0.33
SNCAIP-202ENST00000261368 LINC00173Q6ZV60 143 aa13.01□□□□□ -0.33
SNCAIP-202ENST00000261368 MC5RP33032 325 aa13.01□□□□□ -0.33
SNCAIP-202ENST00000261368 Q8N976 141 aa13.01□□□□□ -0.33
SNCAIP-202ENST00000261368 PRSS3P2Q8NHM4 247 aa13.01□□□□□ -0.33
SNCAIP-202ENST00000261368 IGFBPL1Q8WX77 278 aa13.01□□□□□ -0.33
SNCAIP-202ENST00000261368 ONECUT1Q9UBC0 465 aa13.01□□□□□ -0.33
SNCAIP-202ENST00000261368 C22orf46C9J442 243 aa13□□□□□ -0.33
SNCAIP-202ENST00000261368 PCP4P48539 62 aa13□□□□□ -0.33
SNCAIP-202ENST00000261368 MRPL27Q9P0M9 148 aaKnown RBP13□□□□□ -0.33
SNCAIP-202ENST00000261368 ANKHD1Q8IWZ3 2542 aaKnown RBP13□□□□□ -0.33
SNCAIP-202ENST00000261368 RUSC1-AS1Q66K80 236 aa13□□□□□ -0.33
SNCAIP-202ENST00000261368 SELENOKQ9Y6D0 94 aa13□□□□□ -0.33
SNCAIP-202ENST00000261368 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13□□□□□ -0.33
SNCAIP-202ENST00000261368 NUDT3O95989 172 aa13□□□□□ -0.33
SNCAIP-202ENST00000261368 LINC00322Q6ZN03 302 aaPredicted RBP13□□□□□ -0.33
SNCAIP-202ENST00000261368 RBM14Q96PK6 669 aaKnown RBP13□□□□□ -0.33
SNCAIP-202ENST00000261368 TMEM191AQ9H0A3 160 aa13□□□□□ -0.33
SNCAIP-202ENST00000261368 HILPDAQ9Y5L2 63 aa13□□□□□ -0.33
SNCAIP-202ENST00000261368 LAMA5O15230 3695 aa13□□□□□ -0.33
SNCAIP-202ENST00000261368 TMEM178BH3BS89 294 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 A0A1B0GWJ7 208 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 PSG1P11464 419 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 FA2HQ7L5A8 372 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 MAP1LC3CQ9BXW4 147 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 LOC102724200A0A096LPH7 203 aaPredicted RBP12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 TCRAP04437 139 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 IGFL2Q6UWQ7 119 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 ZNF841Q6ZN19 808 aa12.99□□□□□ -0.33
SNCAIP-202ENST00000261368 ARHGAP32A7KAX9 2087 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 IGKV1D-37A0A075B6S9 117 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 OR8A1Q8NGG7 326 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 CT45A10P0DMU9 189 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 MPV17L2Q567V2 206 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 RBPMS2Q6ZRY4 209 aaKnown RBP12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 PNKDQ8N490 385 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 OR4F17Q8NGA8 305 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 NCOR1P1Q9H4R4 102 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 LGALS7P47929 136 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 FAM162BQ5T6X4 162 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 CTSZQ9UBR2 303 aa12.98□□□□□ -0.33
SNCAIP-202ENST00000261368 LINC00614P0C842 121 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 CTRLP40313 264 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 IGHV3OR16-8A0A075B7F1 116 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 IGHV3-35A0A0C4DH35 117 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 A0A0G2JNJ9 132 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 K7EQM0 130 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 IGHV1-8P0DP01 117 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 KLF17Q5JT82 389 aaPredicted RBP12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 TEX36Q5VZQ5 186 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 Q9UFV3 132 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 DSCAML1Q8TD84 2053 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 FCGR2BP31994 310 aaPredicted RBP12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 FAM231DQ6ZW35 169 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 FAM57AQ8TBR7 257 aa12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 RAI1Q7Z5J4 1906 aaPredicted RBP12.97□□□□□ -0.33
SNCAIP-202ENST00000261368 CGB1A6NKQ9 187 aa12.96□□□□□ -0.33
SNCAIP-202ENST00000261368 TMEM133Q9H2Q1 129 aa12.96□□□□□ -0.33
SNCAIP-202ENST00000261368 FXYD7P58549 80 aa12.96□□□□□ -0.33
SNCAIP-202ENST00000261368 PPP1R27Q86WC6 154 aa12.96□□□□□ -0.33
SNCAIP-202ENST00000261368 FMC1Q96HJ9 113 aa12.96□□□□□ -0.33
SNCAIP-202ENST00000261368 PSMB11A5LHX3 300 aa12.96□□□□□ -0.34
SNCAIP-202ENST00000261368 LOXP28300 417 aaPredicted RBP12.96□□□□□ -0.34
SNCAIP-202ENST00000261368 SLC25A34Q6PIV7 304 aa12.96□□□□□ -0.34
SNCAIP-202ENST00000261368 MRPL52Q86TS9 123 aaKnown RBP12.96□□□□□ -0.34
SNCAIP-202ENST00000261368 OR4A5Q8NH83 315 aa12.96□□□□□ -0.34
SNCAIP-202ENST00000261368 GTSF1Q8WW33 167 aa12.96□□□□□ -0.34
SNCAIP-202ENST00000261368 RNASE6Q93091 150 aaKnown RBP12.96□□□□□ -0.34
SNCAIP-202ENST00000261368 TACC2O95359 2948 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 IGHV1-69-2A0A0G2JMI3 117 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 GAGE1Q13065 139 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 NGBQ9NPG2 151 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 IGHV3-23P01764 117 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 APOHP02749 345 aaPredicted RBP12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 IL4P05112 153 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 RASL11AQ6T310 242 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 DMXL1Q9Y485 3027 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 IGLC7A0M8Q6 106 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 M0R3E3 92 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 C17orf77Q96MU5 243 aa12.95□□□□□ -0.34
SNCAIP-202ENST00000261368 IGHV1-24A0A0C4DH33 117 aa12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 SYS1-DBNDD2H3BUS1 97 aa12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 OR5AL1P0C617 328 aa12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 UQCRFS1P47985 274 aa12.94□□□□□ -0.34
SNCAIP-202ENST00000261368 C8orf46Q8TAG6 207 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms