RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 NDPQ00604 133 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 KCNIP4Q6PIL6 250 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 LINC00305Q7Z4B0 112 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 TBX15Q96SF7 602 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 WNT10AQ9GZT5 417 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 OR51M1Q9H341 326 aa13.93□□□□□ -0.18
SSB-201ENST00000260956 TRAV9-1A0A075B6T8 112 aa13.92□□□□□ -0.18
SSB-201ENST00000260956 IGHV3-21A0A0B4J1V1 117 aa13.92□□□□□ -0.18
SSB-201ENST00000260956 HELTA6NFD8 242 aa13.92□□□□□ -0.18
SSB-201ENST00000260956 SGMS2Q8NHU3 365 aa13.92□□□□□ -0.18
SSB-201ENST00000260956 C22orf15Q8WYQ4 148 aa13.92□□□□□ -0.18
SSB-201ENST00000260956 HIVEP2P31629 2446 aa13.92□□□□□ -0.18
SSB-201ENST00000260956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.91□□□□□ -0.184e-7■■■■□ 24.2
SSB-201ENST00000260956 GCGP01275 180 aa13.91□□□□□ -0.18
SSB-201ENST00000260956 HNF1AP20823 631 aa13.91□□□□□ -0.18
SSB-201ENST00000260956 CD24P25063 80 aa13.91□□□□□ -0.18
SSB-201ENST00000260956 IL36BQ9NZH7 164 aa13.91□□□□□ -0.18
SSB-201ENST00000260956 CDC42EP3Q9UKI2 254 aa13.91□□□□□ -0.18
SSB-201ENST00000260956 A0A1W2PRD5 423 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 A0A1W2PRF3 423 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 A0A1W2PRM7 423 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 GNG4P50150 75 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 CCDC144NLQ6NUI1 221 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 NPIPB5A8MRT5 1133 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 FXYD3Q14802 87 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 PLGLAQ15195 96 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 BTF3L4Q96K17 158 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 FANCD2OSQ96PS1 177 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 GPR61Q9BZJ8 451 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 OSTCQ9NRP0 149 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 PITPNC1Q9UKF7 332 aa13.9□□□□□ -0.18
SSB-201ENST00000260956 POLR3KQ9Y2Y1 108 aaPredicted RBP13.9□□□□□ -0.18
SSB-201ENST00000260956 TBL2Q9Y4P3 447 aaKnown RBP13.9□□□□□ -0.18
SSB-201ENST00000260956 IGLV11-55A0A075B6I3 123 aa13.89□□□□□ -0.19
SSB-201ENST00000260956 HYPMO75409 117 aa13.89□□□□□ -0.19
SSB-201ENST00000260956 PSG1P11464 419 aa13.89□□□□□ -0.19
SSB-201ENST00000260956 TAS2R60P59551 318 aa13.89□□□□□ -0.19
SSB-201ENST00000260956 OR5I1Q13606 314 aa13.89□□□□□ -0.19
SSB-201ENST00000260956 STXBP6Q8NFX7 210 aa13.89□□□□□ -0.19
SSB-201ENST00000260956 OR1B1Q8NGR6 318 aa13.89□□□□□ -0.19
SSB-201ENST00000260956 C7orf69Q9H7B7 122 aa13.89□□□□□ -0.19
SSB-201ENST00000260956 F8W735 103 aaPredicted RBP13.88□□□□□ -0.19
SSB-201ENST00000260956 SLC17A3O00476 420 aa13.88□□□□□ -0.19
SSB-201ENST00000260956 PEX7O00628 323 aa13.88□□□□□ -0.19
SSB-201ENST00000260956 ORM2P19652 201 aa13.88□□□□□ -0.19
SSB-201ENST00000260956 YPEL3P61236 119 aaPredicted RBP13.88□□□□□ -0.19
SSB-201ENST00000260956 TIGITQ495A1 244 aa13.88□□□□□ -0.19
SSB-201ENST00000260956 ZNF562Q6V9R5 426 aa13.88□□□□□ -0.19
SSB-201ENST00000260956 ZNF48Q96MX3 618 aaPredicted RBP13.88□□□□□ -0.19
SSB-201ENST00000260956 MRPL27Q9P0M9 148 aaKnown RBP13.88□□□□□ -0.19
SSB-201ENST00000260956 ISLRO14498 428 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 UBE2E1P51965 193 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 CX3CL1P78423 397 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 TMEM183AQ8IXX5 376 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 OR1L6Q8NGR2 347 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 FAM103A1Q9BTL3 118 aaKnown RBP13.87□□□□□ -0.19
SSB-201ENST00000260956 LPAR2Q9HBW0 351 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 CNIH1O95406 144 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
SSB-201ENST00000260956 KLK9Q2XQG4 91 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 PYY3Q5JQD4 70 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 ARPC1AQ92747 370 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 GAR1Q9NY12 217 aaKnown RBP13.87□□□□□ -0.19
SSB-201ENST00000260956 TMEM14CQ9P0S9 112 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 KLK9Q9UKQ9 250 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 KLF12Q9Y4X4 402 aa13.87□□□□□ -0.19
SSB-201ENST00000260956 WNK2Q9Y3S1 2297 aa13.86□□□□□ -0.19
SSB-201ENST00000260956 A0A0U1RQK1 487 aa13.86□□□□□ -0.19
SSB-201ENST00000260956 ZNF320A2RRD8 509 aa13.86□□□□□ -0.19
SSB-201ENST00000260956 CD5LO43866 347 aa13.86□□□□□ -0.19
SSB-201ENST00000260956 TTC9CQ8N5M4 171 aa13.86□□□□□ -0.19
SSB-201ENST00000260956 LINC00479Q96M42 142 aa13.86□□□□□ -0.19
SSB-201ENST00000260956 Q8N9W7 124 aa13.85□□□□□ -0.19
SSB-201ENST00000260956 HIST1H2BLQ99880 126 aa13.85□□□□□ -0.19
SSB-201ENST00000260956 HIGD1AQ9Y241 93 aa13.85□□□□□ -0.19
SSB-201ENST00000260956 TOX4O94842 621 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 TGFAP01135 160 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 HES1Q14469 280 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 KLF17Q5JT82 389 aaPredicted RBP13.84□□□□□ -0.19
SSB-201ENST00000260956 CYB5R2Q6BCY4 276 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 ZNF414Q96IQ9 312 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 SLC25A39Q9BZJ4 359 aaPredicted RBP13.84□□□□□ -0.19
SSB-201ENST00000260956 RNASE7Q9H1E1 156 aaKnown RBP13.84□□□□□ -0.19
SSB-201ENST00000260956 JMJD1CQ15652 2540 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 H3BRN7 92 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 MRPS12O15235 138 aaKnown RBP13.84□□□□□ -0.19
SSB-201ENST00000260956 TOMM40O96008 361 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 S100A9P06702 114 aaKnown RBP13.84□□□□□ -0.19
SSB-201ENST00000260956 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 S100A12P80511 92 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 TMEM183BQ1AE95 376 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 ZNF600Q6ZNG1 722 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 FAM231DQ6ZW35 169 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 SHANK2-AS3Q9BTD1 123 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 EPDR1Q9UM22 224 aa13.84□□□□□ -0.19
SSB-201ENST00000260956 WI2-2373I1.2A0A1W2PRP0 233 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 INAFM1C9JVW0 142 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 HLA-DRB1P01911 266 aa13.83□□□□□ -0.2
SSB-201ENST00000260956 FRMD6-AS1P0C7T7 363 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms