RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 GCHFRP30047 84 aa12.98□□□□□ -0.33
HLA-F-216ENST00000259951 ZNF343Q6P1L6 599 aa12.98□□□□□ -0.33
HLA-F-216ENST00000259951 Q6ZSV7 163 aa12.98□□□□□ -0.33
HLA-F-216ENST00000259951 Q71RC1 249 aaPredicted RBP12.98□□□□□ -0.33
HLA-F-216ENST00000259951 SCRT1Q9BWW7 348 aa12.98□□□□□ -0.33
HLA-F-216ENST00000259951 TMPRSS5Q9H3S3 457 aa12.98□□□□□ -0.33
HLA-F-216ENST00000259951 MRPL27Q9P0M9 148 aaKnown RBP12.98□□□□□ -0.33
HLA-F-216ENST00000259951 VAX2Q9UIW0 290 aa12.98□□□□□ -0.33
HLA-F-216ENST00000259951 PUS1Q9Y606 427 aaKnown RBP eCLIP12.98□□□□□ -0.33
HLA-F-216ENST00000259951 LOC102723971A0A1B0GUV8 181 aa12.97□□□□□ -0.33
HLA-F-216ENST00000259951 BMPR1BO00238 502 aa12.97□□□□□ -0.33
HLA-F-216ENST00000259951 ARL3P36405 182 aa12.97□□□□□ -0.33
HLA-F-216ENST00000259951 SRSF3P84103 164 aaKnown RBP12.97□□□□□ -0.33
HLA-F-216ENST00000259951 OR5AU1Q8NGC0 362 aa12.97□□□□□ -0.33
HLA-F-216ENST00000259951 UHRF2Q96PU4 802 aa12.97□□□□□ -0.33
HLA-F-216ENST00000259951 TMEM231Q9H6L2 316 aa12.97□□□□□ -0.33
HLA-F-216ENST00000259951 RNF152Q8N8N0 203 aa12.96□□□□□ -0.33
HLA-F-216ENST00000259951 OR4X2Q8NGF9 303 aa12.96□□□□□ -0.33
HLA-F-216ENST00000259951 SLC25A2Q9BXI2 301 aa12.96□□□□□ -0.33
HLA-F-216ENST00000259951 SLC25A39Q9BZJ4 359 aaPredicted RBP12.96□□□□□ -0.33
HLA-F-216ENST00000259951 TMEM218A2RU14 115 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 HSPB1P04792 205 aaKnown RBP12.95□□□□□ -0.34
HLA-F-216ENST00000259951 ZP3P21754 424 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 ICAM4Q14773 271 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 FAM167A-AS1Q96KT0 104 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 RARRES2Q99969 163 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 TXNDC17Q9BRA2 123 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 ARL2-SNX15V9GYD0 113 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 NF1P21359 2839 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 NDUFS6O75380 124 aaKnown RBP12.95□□□□□ -0.34
HLA-F-216ENST00000259951 IGHV3-11P01762 117 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 TOMM20LQ6UXN7 152 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 KLHDC1Q8N7A1 406 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 RXFP4Q8TDU9 374 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 SHANK2-AS3Q9BTD1 123 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 PAXXQ9BUH6 204 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 SLC35B3Q9H1N7 401 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 OR51M1Q9H341 326 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 C16orf95Q9H693 158 aa12.95□□□□□ -0.34
HLA-F-216ENST00000259951 NIPBLQ6KC79 2804 aaeCLIP12.94□□□□□ -0.34
HLA-F-216ENST00000259951 TRAV5A0A0B4J249 113 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 PPP5D1E7EU14 171 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 H3BRN7 92 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 TCF21O43680 179 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 CRLF1O75462 422 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 UBE2L3P68036 154 aaKnown RBP12.94□□□□□ -0.34
HLA-F-216ENST00000259951 MEF2BQ02080 365 aaPredicted RBP12.94□□□□□ -0.34
HLA-F-216ENST00000259951 USF2Q15853 346 aaPredicted RBP12.94□□□□□ -0.34
HLA-F-216ENST00000259951 MORN5Q5VZ52 161 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 LCNL1Q6ZST4 164 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 MYOZ3Q8TDC0 251 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 UBE2E2Q96LR5 201 aa12.94□□□□□ -0.34
HLA-F-216ENST00000259951 PEF1Q9UBV8 284 aaKnown RBP12.94□□□□□ -0.34
HLA-F-216ENST00000259951 PAGE4O60829 102 aa12.93□□□□□ -0.34
HLA-F-216ENST00000259951 GGCTO75223 188 aaKnown RBP12.93□□□□□ -0.34
HLA-F-216ENST00000259951 RPLP1P05386 114 aaKnown RBP12.93□□□□□ -0.34
HLA-F-216ENST00000259951 SFTA3P0C7M3 94 aa12.93□□□□□ -0.34
HLA-F-216ENST00000259951 RIPPLY3P57055 190 aa12.93□□□□□ -0.34
HLA-F-216ENST00000259951 C10orf99Q6UWK7 81 aa12.93□□□□□ -0.34
HLA-F-216ENST00000259951 SUN5Q8TC36 379 aa12.93□□□□□ -0.34
HLA-F-216ENST00000259951 NDUFA4O00483 81 aa12.92□□□□□ -0.34
HLA-F-216ENST00000259951 KIAA0141Q14154 515 aaPredicted RBP12.92□□□□□ -0.34
HLA-F-216ENST00000259951 ZNF503Q96F45 646 aa12.92□□□□□ -0.34
HLA-F-216ENST00000259951 LINC00052Q96N35 136 aa12.92□□□□□ -0.34
HLA-F-216ENST00000259951 ZFAND3Q9H8U3 227 aa12.92□□□□□ -0.34
HLA-F-216ENST00000259951 TMEM14CQ9P0S9 112 aa12.92□□□□□ -0.34
HLA-F-216ENST00000259951 IGHV3-35A0A0C4DH35 117 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 F8W036 122 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 NDUFA7O95182 113 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 OR10J4P0C629 311 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 CST9LP1Q5W188 147 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 BPIFA4PQ86YQ2 179 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 SEC11CQ9BY50 192 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 ZNF98A6NK75 572 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 C9JQL5 133 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 SRP19P09132 144 aaKnown RBP12.91□□□□□ -0.34
HLA-F-216ENST00000259951 LGALS1P09382 135 aaKnown RBP12.91□□□□□ -0.34
HLA-F-216ENST00000259951 UBE2G2P60604 165 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 METTL26Q96S19 204 aa12.91□□□□□ -0.34
HLA-F-216ENST00000259951 NKX6-2Q9C056 277 aaPredicted RBP12.91□□□□□ -0.34
HLA-F-216ENST00000259951 A0A1W2PRE2 83 aa12.9□□□□□ -0.34
HLA-F-216ENST00000259951 PDE6DO43924 150 aa12.9□□□□□ -0.34
HLA-F-216ENST00000259951 TRBV12-3P01733 135 aa12.9□□□□□ -0.34
HLA-F-216ENST00000259951 PYYP10082 97 aa12.9□□□□□ -0.34
HLA-F-216ENST00000259951 CCDC28AQ8IWP9 274 aa12.9□□□□□ -0.34
HLA-F-216ENST00000259951 OR4F5Q8NH21 305 aa12.9□□□□□ -0.34
HLA-F-216ENST00000259951 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
HLA-F-216ENST00000259951 OR4F4Q96R69 305 aa12.9□□□□□ -0.34
HLA-F-216ENST00000259951 NSD1Q96L73 2696 aaPredicted RBP12.89□□□□□ -0.35
HLA-F-216ENST00000259951 FAM74A7A6NL05 159 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 F6UZH7 168 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 TMEM250H0YL14 139 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 GP9P14770 177 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 NPPCP23582 126 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 LEMD1Q68G75 181 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 OR4F17Q8NGA8 305 aa12.89□□□□□ -0.35
HLA-F-216ENST00000259951 WFDC12Q8WWY7 111 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms