RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 ZNF680Q8NEM1 530 aa11.95□□□□□ -0.5
GYPC-201ENST00000259254 FAM213BQ8TBF2 198 aa11.95□□□□□ -0.5
GYPC-201ENST00000259254 TMEM190Q8WZ59 177 aa11.95□□□□□ -0.5
GYPC-201ENST00000259254 ZNF414Q96IQ9 312 aa11.95□□□□□ -0.5
GYPC-201ENST00000259254 METTL26Q96S19 204 aa11.95□□□□□ -0.5
GYPC-201ENST00000259254 DNAJC4Q9NNZ3 241 aa11.95□□□□□ -0.5
GYPC-201ENST00000259254 RABAC1Q9UI14 185 aa11.95□□□□□ -0.5
GYPC-201ENST00000259254 UFC1Q9Y3C8 167 aa11.95□□□□□ -0.5
GYPC-201ENST00000259254 ELOA3CA0A087WX78 387 aaPredicted RBP11.94□□□□□ -0.5
GYPC-201ENST00000259254 A0A1W2PPV4 95 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 PF4P02776 101 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 MYCNOSP40205 109 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 PLP1P60201 277 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 FAM78BQ5VT40 261 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 PATE2Q6UY27 113 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 S100A7AQ86SG5 101 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 GATAD1Q8WUU5 269 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 NARS2Q96I59 477 aaKnown RBP11.94□□□□□ -0.5
GYPC-201ENST00000259254 UHRF2Q96PU4 802 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 RPRMQ9NS64 109 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 PLA2G2EQ9NZK7 142 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 UBQLN2Q9UHD9 624 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 PFDN2Q9UHV9 154 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 NBEAL1Q6ZS30 2694 aa11.94□□□□□ -0.5
GYPC-201ENST00000259254 NPPCP23582 126 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 S100A7P31151 101 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 SULT1A2P50226 295 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 RAB5CP51148 216 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 RHOBP62745 196 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 KLF5Q13887 457 aaPredicted RBP11.93□□□□□ -0.5
GYPC-201ENST00000259254 PRR31Q5SQ13 230 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 LINC00305Q7Z4B0 112 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 REC114Q7Z4M0 266 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 OR4F17Q8NGA8 305 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 RNF141Q8WVD5 230 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 TMEM37Q8WXS4 190 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 OR4F4Q96R69 305 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 RNF2Q99496 336 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 ACTR3CQ9C0K3 210 aaPredicted RBP11.93□□□□□ -0.5
GYPC-201ENST00000259254 SLC25A22Q9H936 323 aa11.93□□□□□ -0.5
GYPC-201ENST00000259254 IGHV3-49A0A0A0MS15 119 aa11.92□□□□□ -0.5
GYPC-201ENST00000259254 CDC34P49427 236 aaPredicted RBP11.92□□□□□ -0.5
GYPC-201ENST00000259254 FHL3Q13643 280 aa11.92□□□□□ -0.5
GYPC-201ENST00000259254 TM4SF20Q53R12 229 aa11.92□□□□□ -0.5
GYPC-201ENST00000259254 SPATA31B1PQ5VZV4 182 aa11.92□□□□□ -0.5
GYPC-201ENST00000259254 DLX4Q92988 240 aaPredicted RBP11.92□□□□□ -0.5
GYPC-201ENST00000259254 MRPL32Q9BYC8 188 aaKnown RBP11.92□□□□□ -0.5
GYPC-201ENST00000259254 DAZ1Q9NQZ3 744 aaKnown RBP11.92□□□□□ -0.5
GYPC-201ENST00000259254 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
GYPC-201ENST00000259254 FUT9Q9Y231 359 aa11.92□□□□□ -0.5
GYPC-201ENST00000259254 IGHV3OR16-13A0A075B7E8 117 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 IGHV3-74A0A0B4J1X5 117 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 IGHV3-66A0A0C4DH42 116 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 ZNF705EA8MWA4 302 aaPredicted RBP11.91□□□□□ -0.5
GYPC-201ENST00000259254 LGALS9O00182 355 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 EIF3GO75821 320 aaKnown RBP eCLIP11.91□□□□□ -0.5
GYPC-201ENST00000259254 FHITP49789 147 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 IFITM2Q01629 132 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 DPPA3Q6W0C5 159 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 ZNF767PQ75MW2 155 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 MIR17HGQ75NE6 70 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 RPP25LQ8N5L8 163 aaKnown RBP11.91□□□□□ -0.5
GYPC-201ENST00000259254 SCRT1Q9BWW7 348 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 SLC25A39Q9BZJ4 359 aaPredicted RBP11.91□□□□□ -0.5
GYPC-201ENST00000259254 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
GYPC-201ENST00000259254 PEMTQ9UBM1 199 aa11.91□□□□□ -0.5
GYPC-201ENST00000259254 H3BRN7 92 aa11.9□□□□□ -0.5
GYPC-201ENST00000259254 K7EMT4 169 aa11.9□□□□□ -0.5
GYPC-201ENST00000259254 M0QZ24 198 aa11.9□□□□□ -0.5
GYPC-201ENST00000259254 HMGB3O15347 200 aaKnown RBP11.9□□□□□ -0.5
GYPC-201ENST00000259254 LEMD1Q68G75 181 aa11.9□□□□□ -0.5
GYPC-201ENST00000259254 LCN15Q6UWW0 184 aa11.9□□□□□ -0.5
GYPC-201ENST00000259254 RAB24Q969Q5 203 aa11.9□□□□□ -0.5
GYPC-201ENST00000259254 SHANK2-AS3Q9BTD1 123 aa11.9□□□□□ -0.5
GYPC-201ENST00000259254 TRAV5A0A0B4J249 113 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 IGHV7-4-1A0A0J9YVY3 117 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 CTXND1A0A1B0GTU2 59 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 A0A1B0GV50 99 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 A8MWP6 167 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 OVOL1O14753 267 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 CRYBB3P26998 211 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 TAS2R45P59539 299 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 RAB14P61106 215 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 MORN5Q5VZ52 161 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 OR9G4Q8NGQ1 327 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 LRRC20Q8TCA0 184 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 TECRQ9NZ01 308 aaKnown RBP11.89□□□□□ -0.51
GYPC-201ENST00000259254 RNF24Q9Y225 148 aa11.89□□□□□ -0.51
GYPC-201ENST00000259254 A0A1W2PS18 150 aa11.88□□□□□ -0.51
GYPC-201ENST00000259254 TMEM213A2RRL7 107 aa11.88□□□□□ -0.51
GYPC-201ENST00000259254 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
GYPC-201ENST00000259254 C2orf70A6NJV1 201 aa11.88□□□□□ -0.51
GYPC-201ENST00000259254 ZNF98A6NK75 572 aa11.88□□□□□ -0.51
GYPC-201ENST00000259254 APOHP02749 345 aaPredicted RBP11.88□□□□□ -0.51
GYPC-201ENST00000259254 H2AFB1P0C5Y9 115 aa11.88□□□□□ -0.51
GYPC-201ENST00000259254 C8orf88P0DMB2 117 aa11.88□□□□□ -0.51
GYPC-201ENST00000259254 BMI1P35226 326 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms