RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TCEAL7Q9BRU2 100 aa21.67■■□□□ 1.06
CCM2-201ENST00000258781 SLC25A39Q9BZJ4 359 aaPredicted RBP21.67■■□□□ 1.06
CCM2-201ENST00000258781 FBXL7Q9UJT9 491 aa21.67■■□□□ 1.06
CCM2-201ENST00000258781 ACANP16112 2415 aa21.67■■□□□ 1.06
CCM2-201ENST00000258781 SCGB2A1O75556 95 aa21.66■■□□□ 1.06
CCM2-201ENST00000258781 Q56UQ5 140 aa21.66■■□□□ 1.06
CCM2-201ENST00000258781 ELOVL1Q9BW60 279 aa21.66■■□□□ 1.06
CCM2-201ENST00000258781 WI2-2373I1.2A0A1W2PRP0 233 aa21.66■■□□□ 1.06
CCM2-201ENST00000258781 CXCL1P09341 107 aa21.66■■□□□ 1.06
CCM2-201ENST00000258781 TMEM14CQ9P0S9 112 aa21.66■■□□□ 1.06
CCM2-201ENST00000258781 SOX21Q9Y651 276 aaPredicted RBP21.66■■□□□ 1.06
CCM2-201ENST00000258781 S4R3C0 116 aa21.66■■□□□ 1.06
CCM2-201ENST00000258781 FLNBO75369 2602 aaKnown RBP21.65■■□□□ 1.06
CCM2-201ENST00000258781 SMAD7O15105 426 aaKnown RBP21.65■■□□□ 1.06
CCM2-201ENST00000258781 ZNF491Q8N8L2 437 aa21.65■■□□□ 1.06
CCM2-201ENST00000258781 RNF125Q96EQ8 232 aa21.65■■□□□ 1.06
CCM2-201ENST00000258781 TGIF2-C20orf24A0A0A6YYL0 155 aa21.64■■□□□ 1.06
CCM2-201ENST00000258781 HELTA6NFD8 242 aa21.64■■□□□ 1.06
CCM2-201ENST00000258781 PPP1R2P9O14990 202 aa21.64■■□□□ 1.06
CCM2-201ENST00000258781 AMY1AP04745 511 aa21.64■■□□□ 1.06
CCM2-201ENST00000258781 CRIP2P52943 208 aaPredicted RBP21.64■■□□□ 1.06
CCM2-201ENST00000258781 ZNF329Q86UD4 541 aa21.64■■□□□ 1.06
CCM2-201ENST00000258781 C1QL4Q86Z23 238 aa21.64■■□□□ 1.06
CCM2-201ENST00000258781 A6NDX4 124 aa21.64■■□□□ 1.05
CCM2-201ENST00000258781 PGPEP1LA6NFU8 196 aa21.64■■□□□ 1.05
CCM2-201ENST00000258781 OCC1Q8TAD7 63 aa21.64■■□□□ 1.05
CCM2-201ENST00000258781 OR5B12Q96R08 314 aa21.64■■□□□ 1.05
CCM2-201ENST00000258781 SHANK2-AS3Q9BTD1 123 aa21.64■■□□□ 1.05
CCM2-201ENST00000258781 OTOGQ6ZRI0 2925 aa21.64■■□□□ 1.05
CCM2-201ENST00000258781 TRBV24-1A0A075B6N3 115 aa21.63■■□□□ 1.05
CCM2-201ENST00000258781 TRBV9A0A0B4J1U6 114 aa21.63■■□□□ 1.05
CCM2-201ENST00000258781 SH2D7A6NKC9 451 aaPredicted RBP21.63■■□□□ 1.05
CCM2-201ENST00000258781 NBEAP1P0C6P0 100 aa21.63■■□□□ 1.05
CCM2-201ENST00000258781 MYCNOSP40205 109 aa21.63■■□□□ 1.05
CCM2-201ENST00000258781 CYB5R2Q6BCY4 276 aa21.63■■□□□ 1.05
CCM2-201ENST00000258781 S100A7AQ86SG5 101 aa21.63■■□□□ 1.05
CCM2-201ENST00000258781 LINC01548A6NM66 108 aa21.62■■□□□ 1.05
CCM2-201ENST00000258781 H3BRN7 92 aa21.62■■□□□ 1.05
CCM2-201ENST00000258781 PFN1P07737 140 aaKnown RBP21.62■■□□□ 1.05
CCM2-201ENST00000258781 MDFIC2A0A1B0GVS7 189 aa21.62■■□□□ 1.05
CCM2-201ENST00000258781 H3BUX3 64 aa21.62■■□□□ 1.05
CCM2-201ENST00000258781 IL4P05112 153 aa21.62■■□□□ 1.05
CCM2-201ENST00000258781 S100PP25815 95 aa21.62■■□□□ 1.05
CCM2-201ENST00000258781 GALR1P47211 349 aa21.62■■□□□ 1.05
CCM2-201ENST00000258781 AURKAIP1Q9NWT8 199 aaPredicted RBP21.62■■□□□ 1.05
CCM2-201ENST00000258781 GNG4P50150 75 aa21.61■■□□□ 1.05
CCM2-201ENST00000258781 LEMD1Q68G75 181 aa21.61■■□□□ 1.05
CCM2-201ENST00000258781 SFRP2Q96HF1 295 aa21.61■■□□□ 1.05
CCM2-201ENST00000258781 MXRA5Q9NR99 2828 aa21.61■■□□□ 1.05
CCM2-201ENST00000258781 G3V318 75 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 M0QZK8 103 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 RPS10P46783 165 aaKnown RBP21.6■■□□□ 1.05
CCM2-201ENST00000258781 RHOGP84095 191 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 C19orf54Q5BKX5 351 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 CENPWQ5EE01 88 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 ZNF600Q6ZNG1 722 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 FAM210BQ96KR6 192 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 PITPNC1Q9UKF7 332 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 SRP14P37108 136 aaKnown RBP21.6■■□□□ 1.05
CCM2-201ENST00000258781 ZFP82Q8N141 532 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 NECAP1Q8NC96 275 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 ZNF502Q8TBZ5 544 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 BLNKQ8WV28 456 aa21.6■■□□□ 1.05
CCM2-201ENST00000258781 C15orf32Q32M92 178 aa21.59■■□□□ 1.05
CCM2-201ENST00000258781 PYGO2Q9BRQ0 406 aa21.59■■□□□ 1.05
CCM2-201ENST00000258781 OR2T8A6NH00 312 aa21.58■■□□□ 1.05
CCM2-201ENST00000258781 PEX7O00628 323 aa21.58■■□□□ 1.05
CCM2-201ENST00000258781 CTSGP08311 255 aa21.58■■□□□ 1.05
CCM2-201ENST00000258781 HIST1H1EP10412 219 aaKnown RBP21.58■■□□□ 1.05
CCM2-201ENST00000258781 TAS2R60P59551 318 aa21.58■■□□□ 1.05
CCM2-201ENST00000258781 RANP62826 216 aaKnown RBP21.58■■□□□ 1.05
CCM2-201ENST00000258781 TEX38Q6PEX7 206 aa21.58■■□□□ 1.05
CCM2-201ENST00000258781 TRAV41A0A0B4J266 112 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 K7EN84 100 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 TGOLN2O43493 480 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 IGHV3-23P01764 117 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 LY6EQ16553 131 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 TMEM190Q8WZ59 177 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 IMMP2LQ96T52 175 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 GAR1Q9NY12 217 aaKnown RBP21.58■■□□□ 1.04
CCM2-201ENST00000258781 CDC42EP3Q9UKI2 254 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 RNF24Q9Y225 148 aa21.58■■□□□ 1.04
CCM2-201ENST00000258781 CNN1P51911 297 aaKnown RBP21.57■■□□□ 1.04
CCM2-201ENST00000258781 BPIFA4PQ86YQ2 179 aa21.57■■□□□ 1.04
CCM2-201ENST00000258781 IGF2BP2-AS1Q96M15 143 aa21.57■■□□□ 1.04
CCM2-201ENST00000258781 BAHCC1Q9P281 2608 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 USF2Q15853 346 aaPredicted RBP21.56■■□□□ 1.04
CCM2-201ENST00000258781 BIN3Q9NQY0 253 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 SONP18583 2426 aaKnown RBP21.56■■□□□ 1.04
CCM2-201ENST00000258781 FSHBP01225 129 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 IGF1P05019 195 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 HNF1AP20823 631 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 KRTAP1-1Q07627 177 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 KCNIP4Q6PIL6 250 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 OR10G8Q8NGN5 311 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 EPDR1Q9UM22 224 aa21.56■■□□□ 1.04
CCM2-201ENST00000258781 PGPA6NDG6 321 aa21.54■■□□□ 1.04
CCM2-201ENST00000258781 IGHG2P01859 326 aa21.54■■□□□ 1.04
CCM2-201ENST00000258781 SLC25A5P05141 298 aaKnown RBP21.54■■□□□ 1.04
CCM2-201ENST00000258781 SNRPCP09234 159 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms