RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 GPN1Q9HCN4 374 aaPredicted RBP15.25■□□□□ 0.03
NEDD8-201ENST00000250495 PRR13Q9NZ81 148 aa15.25■□□□□ 0.03
NEDD8-201ENST00000250495 FRAS1Q86XX4 4008 aa15.25■□□□□ 0.03
NEDD8-201ENST00000250495 TRAV10A0A0B4J240 114 aa15.24■□□□□ 0.03
NEDD8-201ENST00000250495 NUP62P37198 522 aaPredicted RBP15.24■□□□□ 0.03
NEDD8-201ENST00000250495 SRPXP78539 464 aa15.24■□□□□ 0.03
NEDD8-201ENST00000250495 LYZL2Q7Z4W2 148 aa15.24■□□□□ 0.03
NEDD8-201ENST00000250495 RBKSQ9H477 322 aa15.24■□□□□ 0.03
NEDD8-201ENST00000250495 ELOA3CA0A087WX78 387 aaPredicted RBP15.23■□□□□ 0.03
NEDD8-201ENST00000250495 GPX4P36969 197 aaPredicted RBP15.23■□□□□ 0.03
NEDD8-201ENST00000250495 SUPT4H1P63272 117 aaKnown RBP15.23■□□□□ 0.03
NEDD8-201ENST00000250495 FCN2Q15485 313 aa15.23■□□□□ 0.03
NEDD8-201ENST00000250495 RNF125Q96EQ8 232 aa15.23■□□□□ 0.03
NEDD8-201ENST00000250495 H3BMM0 161 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 PRR20EP86478 221 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 PRR20CP86479 221 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 PRR20DP86480 221 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 PRR20BP86481 221 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 PRR20AP86496 221 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 Q6ZTC4 211 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 OR1S1Q8NH92 325 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 FLVCR2Q9UPI3 526 aa15.22■□□□□ 0.03
NEDD8-201ENST00000250495 ZFP92A6NM28 416 aa15.21■□□□□ 0.03
NEDD8-201ENST00000250495 NKX2-1P43699 371 aaPredicted RBP15.21■□□□□ 0.03
NEDD8-201ENST00000250495 OR8G2PQ6IF36 304 aa15.21■□□□□ 0.03
NEDD8-201ENST00000250495 SLC35E1Q96K37 410 aa15.21■□□□□ 0.03
NEDD8-201ENST00000250495 PBDC1Q9BVG4 233 aa15.21■□□□□ 0.03
NEDD8-201ENST00000250495 SSNA1O43805 119 aa15.2■□□□□ 0.02
NEDD8-201ENST00000250495 FABP1P07148 127 aa15.2■□□□□ 0.02
NEDD8-201ENST00000250495 GAMTQ14353 236 aa15.2■□□□□ 0.02
NEDD8-201ENST00000250495 OR11H7Q8NGC8 314 aa15.2■□□□□ 0.02
NEDD8-201ENST00000250495 XCL2Q9UBD3 114 aa15.2■□□□□ 0.02
NEDD8-201ENST00000250495 DUXBA0A1W2PPF3 345 aa15.19■□□□□ 0.02
NEDD8-201ENST00000250495 HLA-DRB4P13762 266 aa15.19■□□□□ 0.02
NEDD8-201ENST00000250495 ID1P41134 155 aa15.19■□□□□ 0.02
NEDD8-201ENST00000250495 RAB11AP62491 216 aa15.19■□□□□ 0.02
NEDD8-201ENST00000250495 PAIP2BQ9ULR5 123 aaKnown RBP15.19■□□□□ 0.02
NEDD8-201ENST00000250495 HLA-DRB4X5D2U9 266 aa15.19■□□□□ 0.02
NEDD8-201ENST00000250495 DNAH10Q8IVF4 4471 aa15.19■□□□□ 0.02
NEDD8-201ENST00000250495 IGHV4-4A0A075B6R2 117 aa15.18■□□□□ 0.02
NEDD8-201ENST00000250495 ANXA7P20073 488 aaKnown RBP15.18■□□□□ 0.02
NEDD8-201ENST00000250495 ZNF90Q03938 601 aa15.18■□□□□ 0.02
NEDD8-201ENST00000250495 C1orf194Q5T5A4 169 aa15.18■□□□□ 0.02
NEDD8-201ENST00000250495 ASB13Q8WXK3 278 aa15.18■□□□□ 0.02
NEDD8-201ENST00000250495 HYLS1Q96M11 299 aa15.18■□□□□ 0.02
NEDD8-201ENST00000250495 RNF126Q9BV68 326 aa15.18■□□□□ 0.02
NEDD8-201ENST00000250495 IGKV1D-37A0A075B6S9 117 aa15.17■□□□□ 0.02
NEDD8-201ENST00000250495 NKX2-5P52952 324 aaPredicted RBP15.17■□□□□ 0.02
NEDD8-201ENST00000250495 C12orf74Q32Q52 190 aa15.17■□□□□ 0.02
NEDD8-201ENST00000250495 TMEM128Q5BJH2 165 aa15.17■□□□□ 0.02
NEDD8-201ENST00000250495 LINC00052Q96N35 136 aa15.17■□□□□ 0.02
NEDD8-201ENST00000250495 VPS13DQ5THJ4 4388 aa15.17■□□□□ 0.02
NEDD8-201ENST00000250495 DEFB131BA0A096LNP1 70 aa15.16■□□□□ 0.02
NEDD8-201ENST00000250495 PITX3O75364 302 aa15.16■□□□□ 0.02
NEDD8-201ENST00000250495 TMED4Q7Z7H5 227 aa15.16■□□□□ 0.02
NEDD8-201ENST00000250495 NEU1Q99519 415 aa15.16■□□□□ 0.02
NEDD8-201ENST00000250495 SEC22CQ9BRL7 303 aa15.16■□□□□ 0.02
NEDD8-201ENST00000250495 CELA1Q9UNI1 258 aa15.16■□□□□ 0.02
NEDD8-201ENST00000250495 RGS13O14921 159 aa15.15■□□□□ 0.02
NEDD8-201ENST00000250495 MED6O75586 246 aa15.15■□□□□ 0.02
NEDD8-201ENST00000250495 GIPP09681 153 aaPredicted RBP15.15■□□□□ 0.02
NEDD8-201ENST00000250495 SLC25A6P12236 298 aa15.15■□□□□ 0.02
NEDD8-201ENST00000250495 PSMB3P49720 205 aa15.15■□□□□ 0.02
NEDD8-201ENST00000250495 LYZP61626 148 aa15.15■□□□□ 0.02
NEDD8-201ENST00000250495 FOXI2Q6ZQN5 318 aa15.15■□□□□ 0.02
NEDD8-201ENST00000250495 ZNF431Q8TF32 576 aaPredicted RBP15.15■□□□□ 0.02
NEDD8-201ENST00000250495 TRGV9Q99603 122 aa15.15■□□□□ 0.02
NEDD8-201ENST00000250495 SAV1Q9H4B6 383 aaPredicted RBP15.15■□□□□ 0.02
NEDD8-201ENST00000250495 SMIM9A6NGZ8 99 aa15.14■□□□□ 0.01
NEDD8-201ENST00000250495 CFDP00746 253 aaPredicted RBP15.14■□□□□ 0.01
NEDD8-201ENST00000250495 CXCL3P19876 107 aa15.14■□□□□ 0.01
NEDD8-201ENST00000250495 UBE2MP61081 183 aaKnown RBP15.14■□□□□ 0.01
NEDD8-201ENST00000250495 RPP30P78346 268 aaKnown RBP15.14■□□□□ 0.01
NEDD8-201ENST00000250495 GDF5OSQ5U4N7 250 aa15.14■□□□□ 0.01
NEDD8-201ENST00000250495 SPATA31B1PQ5VZV4 182 aa15.14■□□□□ 0.01
NEDD8-201ENST00000250495 ZNF705AQ6ZN79 300 aaPredicted RBP15.14■□□□□ 0.01
NEDD8-201ENST00000250495 OR8I2Q8N0Y5 310 aa15.14■□□□□ 0.01
NEDD8-201ENST00000250495 LRTM2Q8N967 370 aa15.14■□□□□ 0.01
NEDD8-201ENST00000250495 COQ8AQ8NI60 647 aa15.14■□□□□ 0.01
NEDD8-201ENST00000250495 CLUHP3Q96NS8 147 aa15.14■□□□□ 0.01
NEDD8-201ENST00000250495 TMEM189A5PLL7 270 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 IGKV3-20P01619 116 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 OR4E1P0C645 316 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 IAPPP10997 89 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 VAMP1P23763 118 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 RAP2BP61225 183 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 OR2F1Q13607 317 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 SAMD13Q5VXD3 122 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 GGNBP1Q5YKI7 109 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 ZNF767PQ75MW2 155 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 CIB3Q96Q77 187 aaPredicted RBP15.13■□□□□ 0.01
NEDD8-201ENST00000250495 MGAT4CQ9UBM8 478 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 TMED3Q9Y3Q3 217 aa15.13■□□□□ 0.01
NEDD8-201ENST00000250495 DNAH6Q9C0G6 4158 aa15.12■□□□□ 0.01
NEDD8-201ENST00000250495 AMBPP02760 352 aa15.12■□□□□ 0.01
NEDD8-201ENST00000250495 SPART-AS1P0CW21 52 aa15.12■□□□□ 0.01
NEDD8-201ENST00000250495 THAP8Q8NA92 274 aa15.12■□□□□ 0.01
NEDD8-201ENST00000250495 OR4B1Q8NGF8 309 aa15.12■□□□□ 0.01
NEDD8-201ENST00000250495 ZNF705FA8MVS1 300 aaPredicted RBP15.11■□□□□ 0.01
NEDD8-201ENST00000250495 ISLRO14498 428 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms