RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 IL15RAQ13261 267 aa9.42□□□□□ -0.9
VPREB3-201ENST00000248948 OR2F1Q13607 317 aa9.42□□□□□ -0.9
VPREB3-201ENST00000248948 ZNF124Q15973 351 aa9.42□□□□□ -0.9
VPREB3-201ENST00000248948 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
VPREB3-201ENST00000248948 CYP2G1PQ6ZSU1 146 aa9.42□□□□□ -0.9
VPREB3-201ENST00000248948 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
VPREB3-201ENST00000248948 INMT-MINDY4F8WBC2 141 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 RPL35AP18077 110 aaKnown RBP9.41□□□□□ -0.9
VPREB3-201ENST00000248948 CAV2P51636 162 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 S100A10P60903 97 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 LEMD1Q68G75 181 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 TEPPQ6URK8 271 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 ZNF546Q86UE3 836 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 PPP1R14BQ96C90 147 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 OVOL2Q9BRP0 275 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 TMEM147Q9BVK8 224 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 NPVFQ9HCQ7 196 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 LYRM2Q9NU23 88 aaPredicted RBP9.41□□□□□ -0.9
VPREB3-201ENST00000248948 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
VPREB3-201ENST00000248948 STARD9Q9P2P6 4700 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 SPRY2O43597 315 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 DEDDO75618 318 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 LINC00869P0C866 280 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 MEOX2P50222 304 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 PLP1P60201 277 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 RRAS2P62070 204 aaPredicted RBP9.4□□□□□ -0.9
VPREB3-201ENST00000248948 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 RAB32Q13637 225 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 TMEM41BQ5BJD5 291 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 S100A7AQ86SG5 101 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
VPREB3-201ENST00000248948 STHQ8IWL8 128 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 GATAD1Q8WUU5 269 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 RNF183Q96D59 192 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 GPR82Q96P67 336 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 CSTL1Q9H114 145 aa9.4□□□□□ -0.9
VPREB3-201ENST00000248948 AGRNO00468 2067 aa9.4□□□□□ -0.91
VPREB3-201ENST00000248948 H3BRN7 92 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 GOSR2O14653 212 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 SPP1P10451 314 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 LYL1P12980 280 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 PSMB3P49720 205 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 BCAP31P51572 246 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 CASC10Q5T4H9 136 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 PXDC1Q5TGL8 231 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
VPREB3-201ENST00000248948 TMEM182Q6ZP80 229 aaPredicted RBP9.39□□□□□ -0.91
VPREB3-201ENST00000248948 STX12Q86Y82 276 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 OR8I2Q8N0Y5 310 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 OR1B1Q8NGR6 318 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 IL17DQ8TAD2 202 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 NMES1Q9C002 83 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 RNF24Q9Y225 148 aa9.39□□□□□ -0.91
VPREB3-201ENST00000248948 ZNF98A6NK75 572 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 SOCS3O14543 225 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 PTTG1O95997 202 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 CA1P00915 261 aaPredicted RBP9.38□□□□□ -0.91
VPREB3-201ENST00000248948 ORM2P19652 201 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
VPREB3-201ENST00000248948 GALR1P47211 349 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 SULT1A1P50225 295 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 RAP2BP61225 183 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 HBG1P69891 147 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 HBG2P69892 147 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 CYCSP99999 105 aaKnown RBP9.38□□□□□ -0.91
VPREB3-201ENST00000248948 ARL16Q0P5N6 197 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 SLC25A32Q9H2D1 315 aa9.38□□□□□ -0.91
VPREB3-201ENST00000248948 ISLRO14498 428 aa9.37□□□□□ -0.91
VPREB3-201ENST00000248948 HYPMO75409 117 aa9.37□□□□□ -0.91
VPREB3-201ENST00000248948 ATF4P18848 351 aaPredicted RBP9.37□□□□□ -0.91
VPREB3-201ENST00000248948 ID1P41134 155 aa9.37□□□□□ -0.91
VPREB3-201ENST00000248948 TMEM252Q8N6L7 170 aa9.37□□□□□ -0.91
VPREB3-201ENST00000248948 SLC25A39Q9BZJ4 359 aaPredicted RBP9.37□□□□□ -0.91
VPREB3-201ENST00000248948 SLC25A22Q9H936 323 aa9.37□□□□□ -0.91
VPREB3-201ENST00000248948 UQCC1Q9NVA1 299 aa9.37□□□□□ -0.91
VPREB3-201ENST00000248948 HIGD1AQ9Y241 93 aa9.37□□□□□ -0.91
VPREB3-201ENST00000248948 DYNC2H1Q8NCM8 4307 aaKnown RBP9.37□□□□□ -0.91
VPREB3-201ENST00000248948 IGSF23A1L1A6 192 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 FAM24AA6NFZ4 105 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 E5RGE8 158 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 AGPAT2O15120 278 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 CST7O76096 145 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 PET100P0DJ07 73 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 HLA-DRB4P13762 266 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 RPL7P18124 248 aaKnown RBP9.36□□□□□ -0.91
VPREB3-201ENST00000248948 S100A11P31949 105 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 RAB31Q13636 194 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 TMEM217Q8N7C4 229 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 MGST2Q99735 147 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 SCRT1Q9BWW7 348 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 DOK5Q9P104 306 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 WDR83OSQ9Y284 106 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 HLA-DRB4X5D2U9 266 aa9.36□□□□□ -0.91
VPREB3-201ENST00000248948 UBE2L5PA0A1B0GUS4 154 aa9.35□□□□□ -0.91
VPREB3-201ENST00000248948 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
VPREB3-201ENST00000248948 SSNA1O43805 119 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms