RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ACTL10Q5JWF8 245 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 GNG5P63218 68 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 Q6ZWC4 215 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 TEX45Q8NA69 505 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 TIMD4Q96H15 378 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 SERTAD4Q9NUC0 356 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 NOTCH3Q9UM47 2321 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 CELSR1Q9NYQ6 3014 aa12.59□□□□□ -0.39
LRFN1-201ENST00000248668 CA1P00915 261 aaPredicted RBP12.58□□□□□ -0.39
LRFN1-201ENST00000248668 COMPP49747 757 aaPredicted RBP12.58□□□□□ -0.39
LRFN1-201ENST00000248668 KRTDAPP60985 99 aa12.58□□□□□ -0.39
LRFN1-201ENST00000248668 SRSF12Q8WXF0 261 aaKnown RBP12.58□□□□□ -0.39
LRFN1-201ENST00000248668 C11orf52Q96A22 123 aa12.58□□□□□ -0.39
LRFN1-201ENST00000248668 Q6ZN92 141 aa12.58□□□□□ -0.4
LRFN1-201ENST00000248668 TMEM238C9JI98 176 aa12.58□□□□□ -0.4
LRFN1-201ENST00000248668 TOX4O94842 621 aa12.58□□□□□ -0.4
LRFN1-201ENST00000248668 CD99P14209 185 aa12.58□□□□□ -0.4
LRFN1-201ENST00000248668 UQCRFS1P47985 274 aa12.58□□□□□ -0.4
LRFN1-201ENST00000248668 OR8I2Q8N0Y5 310 aa12.58□□□□□ -0.4
LRFN1-201ENST00000248668 ZFHX3Q15911 3703 aa12.57□□□□□ -0.4
LRFN1-201ENST00000248668 NDUFB8O95169 186 aa12.57□□□□□ -0.4
LRFN1-201ENST00000248668 KLF17Q5JT82 389 aaPredicted RBP12.57□□□□□ -0.4
LRFN1-201ENST00000248668 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
LRFN1-201ENST00000248668 TIGITQ495A1 244 aa12.57□□□□□ -0.4
LRFN1-201ENST00000248668 TNFRSF14Q92956 283 aa12.57□□□□□ -0.4
LRFN1-201ENST00000248668 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
LRFN1-201ENST00000248668 INS-IGF2F8WCM5 200 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 UBTD1Q9HAC8 227 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 LOC105371242A0A075B767 164 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 TEX22C9J3V5 150 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 CRYGBP07316 175 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 HTR1DP28221 377 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 RPL15P61313 204 aaKnown RBP12.56□□□□□ -0.4
LRFN1-201ENST00000248668 PRR27Q6MZM9 219 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 SSBP3Q9BWW4 388 aaPredicted RBP12.56□□□□□ -0.4
LRFN1-201ENST00000248668 MRPL32Q9BYC8 188 aaKnown RBP12.56□□□□□ -0.4
LRFN1-201ENST00000248668 IER3P46695 156 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 LCN2P80188 198 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 FOXL1Q12952 345 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 TPTE2P1Q5T6R2 138 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 ATOH7Q8N100 152 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 KIR3DL3Q8N743 410 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 OR1L4Q8NGR5 311 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 CMTM2Q8TAZ6 248 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 C19orf24Q9BVV8 132 aa12.56□□□□□ -0.4
LRFN1-201ENST00000248668 CIDEAO60543 219 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 RBP4P02753 201 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 TYMSP04818 313 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 ADMP35318 185 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 HNRNPA3P51991 378 aaKnown RBP12.55□□□□□ -0.4
LRFN1-201ENST00000248668 LYZP61626 148 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 TMEM183BQ1AE95 376 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 CFAP46Q8IYW2 2715 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 C9JCJ5 164 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 RPL19P84098 196 aaKnown RBP12.55□□□□□ -0.4
LRFN1-201ENST00000248668 PRR31Q5SQ13 230 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 THAP8Q8NA92 274 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 IL36BQ9NZH7 164 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 AMMECR1Q9Y4X0 333 aaPredicted RBP12.55□□□□□ -0.4
LRFN1-201ENST00000248668 A0A1W2PRE2 83 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 WNT10AQ9GZT5 417 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 V9GYV3 84 aa12.55□□□□□ -0.4
LRFN1-201ENST00000248668 SELENOTP62341 195 aa12.54□□□□□ -0.4
LRFN1-201ENST00000248668 C20orf144Q9BQM9 153 aa12.54□□□□□ -0.4
LRFN1-201ENST00000248668 DPM3Q9P2X0 92 aa12.54□□□□□ -0.4
LRFN1-201ENST00000248668 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
LRFN1-201ENST00000248668 RPEL1Q2QD12 228 aa12.54□□□□□ -0.4
LRFN1-201ENST00000248668 C11orf71Q6IPW1 123 aa12.54□□□□□ -0.4
LRFN1-201ENST00000248668 FXYD5Q96DB9 178 aa12.54□□□□□ -0.4
LRFN1-201ENST00000248668 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
LRFN1-201ENST00000248668 F2Z2F3 143 aa12.53□□□□□ -0.4
LRFN1-201ENST00000248668 RNF2Q99496 336 aa12.53□□□□□ -0.4
LRFN1-201ENST00000248668 LY6LH3BQJ8 138 aa12.53□□□□□ -0.4
LRFN1-201ENST00000248668 IGLV2-8P01709 118 aa12.53□□□□□ -0.4
LRFN1-201ENST00000248668 MRPL54Q6P161 138 aaKnown RBP12.53□□□□□ -0.4
LRFN1-201ENST00000248668 ISLRO14498 428 aa12.53□□□□□ -0.4
LRFN1-201ENST00000248668 ZFP36P26651 326 aaKnown RBP12.53□□□□□ -0.4
LRFN1-201ENST00000248668 LY6G5BQ8NDX9 201 aa12.53□□□□□ -0.4
LRFN1-201ENST00000248668 FAM168AQ92567 244 aa12.53□□□□□ -0.4
LRFN1-201ENST00000248668 NCBP2LA6PVI3 153 aaKnown RBP12.52□□□□□ -0.4
LRFN1-201ENST00000248668 SLC25A5P05141 298 aaKnown RBP12.52□□□□□ -0.4
LRFN1-201ENST00000248668 FLNCQ14315 2725 aa12.52□□□□□ -0.4
LRFN1-201ENST00000248668 KIAA1644Q3SXP7 199 aa12.52□□□□□ -0.4
LRFN1-201ENST00000248668 IBA57Q5T440 356 aaKnown RBP12.52□□□□□ -0.4
LRFN1-201ENST00000248668 ZNF329Q86UD4 541 aa12.52□□□□□ -0.4
LRFN1-201ENST00000248668 DYNAPQ8N1N2 210 aa12.52□□□□□ -0.4
LRFN1-201ENST00000248668 PGPA6NDG6 321 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 SNURFLB1AK76 121 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 FSTL3O95633 263 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 PSG1P11464 419 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 GPR6P46095 362 aaPredicted RBP12.52□□□□□ -0.41
LRFN1-201ENST00000248668 C8orf46Q8TAG6 207 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 LRRK2Q5S007 2527 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 USP9YO00507 2555 aaPredicted RBP12.52□□□□□ -0.41
LRFN1-201ENST00000248668 HYPMO75409 117 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 CRYGCP07315 174 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 TEX43Q6ZNM6 134 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 PERPQ96FX8 193 aa12.52□□□□□ -0.41
LRFN1-201ENST00000248668 PEX7O00628 323 aa12.51□□□□□ -0.41
LRFN1-201ENST00000248668 SERF1AO75920 110 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms