RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 NRN1Q9NPD7 142 aa17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 MALRD1Q5VYJ5 2156 aa17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 IGHV3-21A0A0B4J1V1 117 aa17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 SLAQ13239 276 aa17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 KLHDC1Q8N7A1 406 aa17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 TSKUQ8WUA8 353 aa17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 FAM103A1Q9BTL3 118 aaKnown RBP17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 AMTP48728 403 aa17.25■□□□□ 0.35
SH2D3A-201ENST00000245908 PRR27Q6MZM9 219 aa17.25■□□□□ 0.35
SH2D3A-201ENST00000245908 C8orf46Q8TAG6 207 aa17.25■□□□□ 0.35
SH2D3A-201ENST00000245908 PPIAL4CA0A0B4J2A2 164 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 PPIAL4GP0DN37 164 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 LHFPL4Q7Z7J7 247 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 MRPS16Q9Y3D3 137 aaKnown RBP17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 COX11Q9Y6N1 276 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 APC2O95996 2303 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 GVINP1Q7Z2Y8 2422 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 C5orf17Q8NAS9 161 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 ZNF738Q8NE65 137 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 RPEQ96AT9 228 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 GPR82Q96P67 336 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 MLST8Q9BVC4 326 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 ADGRG4Q8IZF6 3080 aa17.24■□□□□ 0.35
SH2D3A-201ENST00000245908 ZNF324O75467 553 aaPredicted RBP17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 FAM87AP0C7U9 286 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 COX7A1P24310 79 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 CA7P43166 264 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 GDF5OSQ5U4N7 250 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 MUC15Q8N387 334 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 FBXL15Q9H469 300 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 GSX1Q9H4S2 264 aaPredicted RBP17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 POLEQ07864 2286 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 LINC01560Q8TB33 94 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 SRSF12Q8WXF0 261 aaKnown RBP17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 FMC1Q96HJ9 113 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 RNF5Q99942 180 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 MRPL27Q9P0M9 148 aaKnown RBP17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 KALRNO60229 2985 aa17.23■□□□□ 0.35
SH2D3A-201ENST00000245908 LY6LH3BQJ8 138 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 FOXC1Q12948 553 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 C18orf32Q8TCD1 76 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 ALKBH7Q9BT30 221 aaPredicted RBP17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 HIGD1AQ9Y241 93 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 PIEZO2Q9H5I5 2752 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 IGLC1P0CG04 106 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 PMCHP20382 165 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 ATP5L2Q7Z4Y8 100 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 Q9H3A6 140 aa17.22■□□□□ 0.35
SH2D3A-201ENST00000245908 HIGD1CA8MV81 97 aa17.21■□□□□ 0.35
SH2D3A-201ENST00000245908 SGK494Q96LW2 274 aa17.21■□□□□ 0.35
SH2D3A-201ENST00000245908 RPH3ALQ9UNE2 315 aa17.21■□□□□ 0.35
SH2D3A-201ENST00000245908 LOC105371242A0A075B767 164 aa17.21■□□□□ 0.34
SH2D3A-201ENST00000245908 I3L2K1 104 aa17.21■□□□□ 0.34
SH2D3A-201ENST00000245908 LTAP01374 205 aa17.21■□□□□ 0.34
SH2D3A-201ENST00000245908 A0A1B0GXF2 115 aa17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 OR2J3O76001 311 aa17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 TCRAP04437 139 aa17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 PSG1P11464 419 aa17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 TSPOP30536 169 aa17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 FBXL19-AS1Q494R0 122 aa17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 NIT1Q86X76 327 aa17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 SRSF8Q9BRL6 282 aaKnown RBP17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 ZNF492Q9P255 531 aa17.2■□□□□ 0.34
SH2D3A-201ENST00000245908 ZNF672Q499Z4 452 aaPredicted RBP17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 PRSS22Q9GZN4 317 aa17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 RPP21Q9H633 154 aaKnown RBP17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 TMEM14CQ9P0S9 112 aa17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 IGHV2-70DA0A0C4DH43 119 aa17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 VWC2LB2RUY7 222 aa17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 KLF5Q13887 457 aaPredicted RBP17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 CT83Q5H943 113 aa17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 OR8B3Q8NGG8 313 aa17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 OR8B2Q96RD0 313 aa17.19■□□□□ 0.34
SH2D3A-201ENST00000245908 C3orf79P0CE67 100 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 LYZP61626 148 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 LY6G5BQ8NDX9 201 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 C19orf71A6NCJ1 209 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 FAM90A27PA6NNH2 459 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 H3BTX0 84 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 UNQ5815/PRO19632Q6UWF5 114 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 LINC00322Q6ZN03 302 aaPredicted RBP17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 SLC25A39Q9BZJ4 359 aaPredicted RBP17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 OTORQ9NRC9 128 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 DMXL2Q8TDJ6 3036 aa17.18■□□□□ 0.34
SH2D3A-201ENST00000245908 PPBPP02775 128 aa17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 PLGLAQ15195 96 aa17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 WNT10AQ9GZT5 417 aa17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 ONECUT1Q9UBC0 465 aa17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 LIPFP07098 398 aa17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 GRNP28799 593 aaKnown RBP17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 FBLN7Q53RD9 439 aa17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 RASL11BQ9BPW5 248 aa17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 SCNM1Q9BWG6 230 aa17.17■□□□□ 0.34
SH2D3A-201ENST00000245908 A8MWL6 223 aa17.16■□□□□ 0.34
SH2D3A-201ENST00000245908 HINT1P49773 126 aaPredicted RBP17.16■□□□□ 0.34
SH2D3A-201ENST00000245908 PMCHL1Q16048 86 aa17.16■□□□□ 0.34
SH2D3A-201ENST00000245908 LDLRAD2Q5SZI1 272 aa17.16■□□□□ 0.34
SH2D3A-201ENST00000245908 FAM19A2Q8N3H0 131 aa17.16■□□□□ 0.34
SH2D3A-201ENST00000245908 TIMM23O14925 209 aa17.16■□□□□ 0.34
SH2D3A-201ENST00000245908 TCF24Q7RTU0 167 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms