RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 C9orf152Q5JTZ5 239 aa13.4□□□□□ -0.26
CDKN1A-201ENST00000244741 PIFOQ8TCI5 191 aa13.4□□□□□ -0.26
CDKN1A-201ENST00000244741 DUX5Q96PT3 197 aa13.4□□□□□ -0.26
CDKN1A-201ENST00000244741 LY96Q9Y6Y9 160 aa13.4□□□□□ -0.26
CDKN1A-201ENST00000244741 FN1P02751 2386 aaKnown RBP13.4□□□□□ -0.26
CDKN1A-201ENST00000244741 HELTA6NFD8 242 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 GGTLC3B5MD39 225 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 INAFM1C9JVW0 142 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 C8orf88P0DMB2 117 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 BRS3P32247 399 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 CNN1P51911 297 aaKnown RBP13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 TAS2R45P59539 299 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 DNLZQ5SXM8 178 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 FAM167A-AS1Q96KT0 104 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 MEGF9Q9H1U4 602 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 NCBP2LA6PVI3 153 aaKnown RBP13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 MOSP00540 346 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 IGHV4-59P01825 116 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 TMEM11P17152 192 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 MMDQ15546 238 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 CENPWQ5EE01 88 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 RNASEH2CQ8TDP1 164 aaKnown RBP13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 DNAJC4Q9NNZ3 241 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 IL36BQ9NZH7 164 aa13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
CDKN1A-201ENST00000244741 REG1AP05451 166 aa13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 SUMO1P63165 101 aaKnown RBP13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 ZNF90Q03938 601 aa13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 VMA21Q3ZAQ7 101 aa13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 SLC25A2Q9BXI2 301 aa13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 FAM106CPP0CH98 169 aa13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 GNG4P50150 75 aa13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 JOSD1Q15040 202 aaPredicted RBP13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 FBXL15Q9H469 300 aa13.38□□□□□ -0.27
CDKN1A-201ENST00000244741 IGKV1D-37A0A075B6S9 117 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 SH2D7A6NKC9 451 aaPredicted RBP13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 FOSL1P15407 271 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 SUB1P53999 127 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 BPIFB3P59826 476 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 FAM209BQ5JX69 171 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 MRPL32Q9BYC8 188 aaKnown RBP13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 GZMBP10144 247 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 LGALS7P47929 136 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 ERVFC1-1P60608 527 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 YPEL3P61236 119 aaPredicted RBP13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 PATE2Q6UY27 113 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 SIGLECL1Q8N7X8 197 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 V9GYV3 84 aa13.37□□□□□ -0.27
CDKN1A-201ENST00000244741 A0A1B0GUS0 222 aa13.36□□□□□ -0.27
CDKN1A-201ENST00000244741 A0A1W2PRE2 83 aa13.36□□□□□ -0.27
CDKN1A-201ENST00000244741 ADMP35318 185 aa13.36□□□□□ -0.27
CDKN1A-201ENST00000244741 PLGLAQ15195 96 aa13.36□□□□□ -0.27
CDKN1A-201ENST00000244741 C9orf139Q6ZV77 190 aa13.36□□□□□ -0.27
CDKN1A-201ENST00000244741 TCRBV4S1A1TA0A5B7 111 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 HOXA3O43365 443 aaPredicted RBP13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 COX7A2P2O60397 106 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 THAP8Q8NA92 274 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 OR5AU1Q8NGC0 362 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 OR5R1Q8NH85 324 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 RNF2Q99496 336 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 IGLC7A0M8Q6 106 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 FCN1O00602 326 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 FRMD6-AS1P0C7T7 363 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 CBLN1P23435 193 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 UBE2L3P68036 154 aaKnown RBP13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 ZNF355PQ9NSJ1 428 aa13.35□□□□□ -0.27
CDKN1A-201ENST00000244741 TRAV9-1A0A075B6T8 112 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 PYYP10082 97 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 SRD5A1P18405 259 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 IER3P46695 156 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 MFAP2P55001 183 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 C10orf113Q5VZT2 155 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 C19orf35Q6ZS72 473 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 MMD2Q8IY49 270 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 TMEM256Q8N2U0 113 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 GBGT1Q8N5D6 347 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 Q8N6K4 173 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 RNASE7Q9H1E1 156 aaKnown RBP13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 PRO1933Q9H354 126 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 NBR2O15453 112 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 NUPR1O60356 82 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 IGLV2-8P01709 118 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 EBI3Q14213 229 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 RPEL1Q2QD12 228 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 Q6YL49 198 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 TEX45Q8NA69 505 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 TMEM18Q96B42 140 aa13.34□□□□□ -0.27
CDKN1A-201ENST00000244741 CRYGBP07316 175 aa13.33□□□□□ -0.28
CDKN1A-201ENST00000244741 APELAP0DMC3 54 aa13.33□□□□□ -0.28
CDKN1A-201ENST00000244741 TIGITQ495A1 244 aa13.33□□□□□ -0.28
CDKN1A-201ENST00000244741 OR1L4Q8NGR5 311 aa13.33□□□□□ -0.28
CDKN1A-201ENST00000244741 IGF2BP2-AS1Q96M15 143 aa13.33□□□□□ -0.28
CDKN1A-201ENST00000244741 SIGLEC9Q9Y336 463 aa13.33□□□□□ -0.28
CDKN1A-201ENST00000244741 GCGP01275 180 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 TNXAQ16473 311 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 OR8I2Q8N0Y5 310 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 TEX29Q8N6K0 151 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 OR1L6Q8NGR2 347 aa13.32□□□□□ -0.28
CDKN1A-201ENST00000244741 MISP3Q96FF7 219 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms