RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 TXNDC17Q9BRA2 123 aa10.13□□□□□ -0.79
HIF3A-201ENST00000244302 PDE6DO43924 150 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 MPDU1O75352 247 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 MT-CO2P00403 227 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 HIST2H2BDQ6DRA6 164 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 KCNIP4Q6PIL6 250 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 RAB24Q969Q5 203 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 ESM1Q9NQ30 184 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 WDR83OSQ9Y284 106 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 NDUFB8O95169 186 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 GPX4P36969 197 aaPredicted RBP10.12□□□□□ -0.79
HIF3A-201ENST00000244302 CDC34P49427 236 aaPredicted RBP10.12□□□□□ -0.79
HIF3A-201ENST00000244302 BPIFB3P59826 476 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 SRSF2Q01130 221 aaKnown RBP10.12□□□□□ -0.79
HIF3A-201ENST00000244302 MIC13Q5XKP0 118 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 CDPF1Q6NVV7 123 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 REC114Q7Z4M0 266 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 SGMS2Q8NHU3 365 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 IMMP2LQ96T52 175 aa10.12□□□□□ -0.79
HIF3A-201ENST00000244302 F6UZH7 168 aa10.11□□□□□ -0.79
HIF3A-201ENST00000244302 K7EIM0 57 aa10.11□□□□□ -0.79
HIF3A-201ENST00000244302 OR2J3O76001 311 aa10.11□□□□□ -0.79
HIF3A-201ENST00000244302 CRYGCP07315 174 aa10.11□□□□□ -0.79
HIF3A-201ENST00000244302 ZNF90Q03938 601 aa10.11□□□□□ -0.79
HIF3A-201ENST00000244302 ACTL10Q5JWF8 245 aa10.11□□□□□ -0.79
HIF3A-201ENST00000244302 PVRIGQ6DKI7 326 aa10.11□□□□□ -0.79
HIF3A-201ENST00000244302 TTC9CQ8N5M4 171 aa10.11□□□□□ -0.79
HIF3A-201ENST00000244302 LSM4Q9Y4Z0 139 aaKnown RBP10.11□□□□□ -0.79
HIF3A-201ENST00000244302 IGKV1D-37A0A075B6S9 117 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 I3L2K1 104 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 RD3LP0DJH9 198 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 DDTP30046 118 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 ZNF329Q86UD4 541 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 ZNF114Q8NC26 417 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 NPVFQ9HCQ7 196 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 KCNIP2Q9NS61 270 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 JMJD1CQ15652 2540 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 GCGP01275 180 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 AMBPP02760 352 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 SUB1P53999 127 aaKnown RBP eCLIP10.1□□□□□ -0.79
HIF3A-201ENST00000244302 LBHQ53QV2 105 aaPredicted RBP10.1□□□□□ -0.79
HIF3A-201ENST00000244302 C14orf144Q96I85 54 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 GGTLC1Q9BX51 225 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 ZNF355PQ9NSJ1 428 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 VPREB3Q9UKI3 123 aa10.1□□□□□ -0.79
HIF3A-201ENST00000244302 IGLV11-55A0A075B6I3 123 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 XKRY2A2RUG3 117 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 INAFM1C9JVW0 142 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 C11orf94C9JXX5 98 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 PAGE4O60829 102 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 OR10J1P30954 320 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 SSTP61278 116 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 ZNF600Q6ZNG1 722 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 GATAD1Q8WUU5 269 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 IGHG2P01859 326 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 TEPPQ6URK8 271 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 KLK15Q9H2R5 256 aa10.09□□□□□ -0.79
HIF3A-201ENST00000244302 A0A1W2PPQ1 181 aa10.08□□□□□ -0.8
HIF3A-201ENST00000244302 NPIPB5A8MRT5 1133 aa10.08□□□□□ -0.8
HIF3A-201ENST00000244302 TMEM144Q7Z5S9 345 aa10.08□□□□□ -0.8
HIF3A-201ENST00000244302 NECAP1Q8NC96 275 aa10.08□□□□□ -0.8
HIF3A-201ENST00000244302 TMEM18Q96B42 140 aa10.08□□□□□ -0.8
HIF3A-201ENST00000244302 MAST4O15021 2626 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 TRAV41A0A0B4J266 112 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 F8W735 103 aaPredicted RBP10.07□□□□□ -0.8
HIF3A-201ENST00000244302 LINC00869P0C866 280 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 GZMBP10144 247 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 C19orf54Q5BKX5 351 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 A0A1W2PPV4 95 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 SPATA31B1PQ5VZV4 182 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 LINC01551Q86U37 167 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 STPG3Q8N7X2 389 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 ELOVL1Q9BW60 279 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 FBXL7Q9UJT9 491 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 PXMP4Q9Y6I8 212 aa10.07□□□□□ -0.8
HIF3A-201ENST00000244302 FAM181BA6NEQ2 426 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 DNAJC9-AS1A6NH13 148 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 PPIFP30405 207 aaKnown RBP10.06□□□□□ -0.8
HIF3A-201ENST00000244302 FOXL1Q12952 345 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 FAM110DQ8TAY7 271 aaPredicted RBP10.06□□□□□ -0.8
HIF3A-201ENST00000244302 CACNG8Q8WXS5 425 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 SRSF8Q9BRL6 282 aaKnown RBP10.06□□□□□ -0.8
HIF3A-201ENST00000244302 ZNF702PQ9H963 129 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 SLC45A2Q9UMX9 530 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 IGHV3OR16-8A0A075B7F1 116 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 IGF1P05019 195 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 ATP5IP56385 69 aaPredicted RBP10.06□□□□□ -0.8
HIF3A-201ENST00000244302 RHOGP84095 191 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 C15orf32Q32M92 178 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 TIGITQ495A1 244 aa10.06□□□□□ -0.8
HIF3A-201ENST00000244302 TRAV9-1A0A075B6T8 112 aa10.05□□□□□ -0.8
HIF3A-201ENST00000244302 CXorf1O96002 111 aa10.05□□□□□ -0.8
HIF3A-201ENST00000244302 NPPCP23582 126 aa10.05□□□□□ -0.8
HIF3A-201ENST00000244302 CNN1P51911 297 aaKnown RBP10.05□□□□□ -0.8
HIF3A-201ENST00000244302 MORN5Q5VZ52 161 aa10.05□□□□□ -0.8
HIF3A-201ENST00000244302 MRPL41Q8IXM3 137 aaKnown RBP10.05□□□□□ -0.8
HIF3A-201ENST00000244302 TMEM116Q8NCL8 245 aa10.05□□□□□ -0.8
HIF3A-201ENST00000244302 SEPSECSQ9HD40 501 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms