RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 CX3CL1P78423 397 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 ZNF90Q03938 601 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 PNRC1Q12796 327 aaPredicted RBP13.5□□□□□ -0.25
HOXC6-201ENST00000243108 C9orf152Q5JTZ5 239 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 C5orf56Q8N8D9 126 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 TECRQ9NZ01 308 aaKnown RBP13.5□□□□□ -0.25
HOXC6-201ENST00000243108 A0A087WWC5 75 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 NCBP2LA6PVI3 153 aaKnown RBP13.5□□□□□ -0.25
HOXC6-201ENST00000243108 PDE6DO43924 150 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 CLN5O75503 358 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 Q8N9W7 124 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 ARPC1AQ92747 370 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 PFDN5Q99471 154 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 SDF2L1Q9HCN8 221 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 DNAJC4Q9NNZ3 241 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 ARL2-SNX15V9GYD0 113 aa13.5□□□□□ -0.25
HOXC6-201ENST00000243108 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 ZNF727A8MUV8 499 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 B4DEV8 164 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 M0QZK8 103 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 NDPQ00604 133 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 OXLD1Q5BKU9 147 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 KPRPQ5T749 579 aaPredicted RBP13.49□□□□□ -0.25
HOXC6-201ENST00000243108 ASPHD1Q5U4P2 390 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 PQLC2Q6ZP29 291 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 OR1L4Q8NGR5 311 aa13.49□□□□□ -0.25
HOXC6-201ENST00000243108 LINC01548A6NM66 108 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 COLCA2A8K830 154 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 HLA-DRB1P01911 266 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 PRB2P02812 416 aaPredicted RBP13.48□□□□□ -0.25
HOXC6-201ENST00000243108 ATP5G3P48201 142 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 TAS2R45P59539 299 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 UBE2G2P60604 165 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 C15orf54Q8N8G6 183 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 ZNF503Q96F45 646 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 NOL4LQ96MY1 436 aaPredicted RBP13.48□□□□□ -0.25
HOXC6-201ENST00000243108 SMIM7Q9BQ49 75 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 FAM103A1Q9BTL3 118 aaKnown RBP13.48□□□□□ -0.25
HOXC6-201ENST00000243108 PARLQ9H300 379 aa13.48□□□□□ -0.25
HOXC6-201ENST00000243108 F6UZH7 168 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 K7EIM0 57 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 C8orf88P0DMB2 117 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 NPPCP23582 126 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 PATE2Q6UY27 113 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 ZNF329Q86UD4 541 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 OR4F17Q8NGA8 305 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 OR4X1Q8NH49 305 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 TMEM167BQ9NRX6 74 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 NAT8Q9UHE5 227 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 IGHV7-81A0A0B4J1V7 117 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 COX7A2P2O60397 106 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 TTC9CQ8N5M4 171 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 RPUSD4Q96CM3 377 aaKnown RBP13.47□□□□□ -0.25
HOXC6-201ENST00000243108 FAM167A-AS1Q96KT0 104 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 LINC00527Q9UJ94 153 aa13.47□□□□□ -0.25
HOXC6-201ENST00000243108 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
HOXC6-201ENST00000243108 IGHV3-21A0A0B4J1V1 117 aa13.46□□□□□ -0.25
HOXC6-201ENST00000243108 EGR2P11161 476 aaPredicted RBP13.46□□□□□ -0.25
HOXC6-201ENST00000243108 PLP1P60201 277 aa13.46□□□□□ -0.25
HOXC6-201ENST00000243108 C10orf113Q5VZT2 155 aa13.46□□□□□ -0.25
HOXC6-201ENST00000243108 IGLV11-55A0A075B6I3 123 aa13.45□□□□□ -0.26
HOXC6-201ENST00000243108 ELOA3CA0A087WX78 387 aaPredicted RBP13.45□□□□□ -0.26
HOXC6-201ENST00000243108 IGLC1P0CG04 106 aa13.45□□□□□ -0.26
HOXC6-201ENST00000243108 TMEM241Q24JQ0 296 aa13.45□□□□□ -0.26
HOXC6-201ENST00000243108 MORN5Q5VZ52 161 aa13.45□□□□□ -0.26
HOXC6-201ENST00000243108 FANCD2OSQ96PS1 177 aa13.45□□□□□ -0.26
HOXC6-201ENST00000243108 SLC25A2Q9BXI2 301 aa13.45□□□□□ -0.26
HOXC6-201ENST00000243108 TSSC4Q9Y5U2 329 aaPredicted RBP13.45□□□□□ -0.26
HOXC6-201ENST00000243108 IGHG2P01859 326 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 ATF4P18848 351 aaPredicted RBP13.44□□□□□ -0.26
HOXC6-201ENST00000243108 ZNF674Q2M3X9 581 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 OR51G1Q8NGK1 321 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 YPEL4Q96NS1 127 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 OR7C2O60412 319 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 WFDC9Q8NEX5 89 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 OR4X2Q8NGF9 303 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 C11orf52Q96A22 123 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 RASL11BQ9BPW5 248 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 ZNF355PQ9NSJ1 428 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 DOK5Q9P104 306 aa13.44□□□□□ -0.26
HOXC6-201ENST00000243108 CXorf65A6NEN9 183 aa13.43□□□□□ -0.26
HOXC6-201ENST00000243108 OR2C1O95371 312 aa13.43□□□□□ -0.26
HOXC6-201ENST00000243108 KIAA0141Q14154 515 aaPredicted RBP13.43□□□□□ -0.26
HOXC6-201ENST00000243108 C18orf65Q6ZTR6 163 aa13.43□□□□□ -0.26
HOXC6-201ENST00000243108 HIST1H2BAQ96A08 127 aa13.43□□□□□ -0.26
HOXC6-201ENST00000243108 ISOC2Q96AB3 205 aa13.43□□□□□ -0.26
HOXC6-201ENST00000243108 TMEM242Q9NWH2 141 aa13.43□□□□□ -0.26
HOXC6-201ENST00000243108 TRAV5A0A0B4J249 113 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 IGKV1-17P01599 117 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 MT-ND4LP03901 98 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 RPL23P62829 140 aaKnown RBP13.42□□□□□ -0.26
HOXC6-201ENST00000243108 KLK9Q2XQG4 91 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 HSPB9Q9BQS6 159 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 KLK9Q9UKQ9 250 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 LOC105371267A0A1B0GV96 52 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 NDUFB4O95168 129 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 PF4V1P10720 104 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 IGLL1P15814 213 aa13.42□□□□□ -0.26
HOXC6-201ENST00000243108 KHDC1LQ5JSQ8 128 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms