RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 RPL29P47914 159 aaKnown RBP8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 CST9LP1Q5W188 147 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 C1QL4Q86Z23 238 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 WNK1Q9H4A3 2382 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 ID1P41134 155 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 PROK1P58294 105 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 LINC00305Q7Z4B0 112 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 AAMDCQ9H7C9 122 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 A0A087WW49 117 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 SPP1P10451 314 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 C9orf62Q8N4C0 152 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 BLNKQ8WV28 456 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 ATP6V0BQ99437 205 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 ZMAT5Q9UDW3 170 aaKnown RBP8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 SEC11BP0C7V7 166 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 SLURP1P55000 103 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 MFAP2P55001 183 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 TMEM41BQ5BJD5 291 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 IL34Q6ZMJ4 242 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 RPH3ALQ9UNE2 315 aa8.64□□□□□ -1.03
TNFAIP3-201ENST00000237289 TRBV9A0A0B4J1U6 114 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 IGLC1P0CG04 106 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 TOMM20LQ6UXN7 152 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 CHRDL1Q9BU40 450 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 SEC14L6B5MCN3 397 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 UBE2L3P68036 154 aaKnown RBP8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 ZFP82Q8N141 532 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 MARC2Q969Z3 335 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 PSMG3Q9BT73 122 aaPredicted RBP8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 SSBP2P81877 361 aaPredicted RBP8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 KHDC3LQ587J8 217 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 LURAP1LQ8IV03 231 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 GGTLC1Q9BX51 225 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 HRH4Q9H3N8 390 aa8.63□□□□□ -1.03
TNFAIP3-201ENST00000237289 HIST2H2BDQ6DRA6 164 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 C2CD4CQ8TF44 421 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 LINC00052Q96N35 136 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 MGST2Q99735 147 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 EIF5A2Q9GZV4 153 aaKnown RBP8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 F8W036 122 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 MRGPRG-AS1Q2M3A8 158 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 CTSGP08311 255 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 GBGT1Q8N5D6 347 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 C16orf92Q96LL3 132 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 PAXXQ9BUH6 204 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 RHPN1-AS1Q9BWJ2 59 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 MRPL32Q9BYC8 188 aaKnown RBP8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 MAP1LC3B2A6NCE7 125 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 CD5P06127 495 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 C8orf88P0DMB2 117 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 UHRF2Q96PU4 802 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 MAP1LC3BQ9GZQ8 125 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 WFDC1Q9HC57 220 aa8.62□□□□□ -1.03
TNFAIP3-201ENST00000237289 F6UZH7 168 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 K7EQM0 130 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 BSXQ3C1V8 233 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 HAPLN4Q86UW8 402 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 NOTCH3Q9UM47 2321 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 TM4SF20Q53R12 229 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 ZNF680Q8NEM1 530 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 PHYHIPLQ96FC7 376 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 SH3BGRL3Q9H299 93 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 TRBV12-3P01733 135 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 SNRPCP09234 159 aaKnown RBP8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 TCTEX1D4Q5JR98 221 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 THAP8Q8NA92 274 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 TMEM167BQ9NRX6 74 aa8.61□□□□□ -1.03
TNFAIP3-201ENST00000237289 PDZD2O15018 2839 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 S100A2P29034 98 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 PSMB3P49720 205 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 PPT1P50897 306 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 TCF24Q7RTU0 167 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 CCDC140Q96MF4 163 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 GPR82Q96P67 336 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 MRPL27Q9P0M9 148 aaKnown RBP8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 IFITM2Q01629 132 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 PQLC2Q6ZP29 291 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 GPHB5Q86YW7 130 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 SELENOKQ9Y6D0 94 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 TMEM88Q6PEY1 159 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 OR9G4Q8NGQ1 327 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 TMEM170AQ8WVE7 144 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 C12orf57Q99622 126 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 FUT9Q9Y231 359 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 ATRQ13535 2644 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 CXorf1O96002 111 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 RAB5BP61020 215 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 PRIMA1Q86XR5 153 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 ZNF747Q9BV97 191 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 OR51M1Q9H341 326 aa8.6□□□□□ -1.03
TNFAIP3-201ENST00000237289 IGKV1-17P01599 117 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 NIT2Q9NQR4 276 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 OR4C46A6NHA9 309 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 BRI3O95415 125 aa8.59□□□□□ -1.03
TNFAIP3-201ENST00000237289 OR10J4P0C629 311 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms