RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 DIRC3C9JPN6 131 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 CYB5R2Q6BCY4 276 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 CLEC7AQ9BXN2 247 aa7.28□□□□□ -1.24
SYDE2-201ENST00000234668 IZUMO1RA6ND01 250 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 TEX22C9J3V5 150 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 NDUFS7O75251 213 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 COMPP49747 757 aaPredicted RBP7.27□□□□□ -1.24
SYDE2-201ENST00000234668 ZNF138P52744 262 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 PRRX1P54821 245 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 TAS2R60P59551 318 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 RPL19P84098 196 aaKnown RBP7.27□□□□□ -1.24
SYDE2-201ENST00000234668 TMEM30BQ3MIR4 351 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 PRNTQ86SH4 94 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 THAP8Q8NA92 274 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 TSKUQ8WUA8 353 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 PERPQ96FX8 193 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 MCRIP2Q9BUT9 160 aaKnown RBP7.27□□□□□ -1.24
SYDE2-201ENST00000234668 Q9H3A6 140 aa7.27□□□□□ -1.24
SYDE2-201ENST00000234668 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.27□□□□□ -1.25
SYDE2-201ENST00000234668 B9A039 149 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 PAFAH1B2P68402 229 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 Q0VG73 95 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 GOLT1AQ6ZVE7 132 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 VAMP8Q9BV40 100 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 TPPP3Q9BW30 176 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 KAAG1Q9UBP8 84 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 MUC21A0A0G2JKD1 596 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 MUC21A0A140T8X8 626 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 TFPI2P48307 235 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 ATP5IP56385 69 aaPredicted RBP7.27□□□□□ -1.25
SYDE2-201ENST00000234668 MUC21Q5SSG8 566 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 RNASEKQ6P5S7 137 aaKnown RBP7.27□□□□□ -1.25
SYDE2-201ENST00000234668 OR4A5Q8NH83 315 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 ZNF586Q9NXT0 402 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 TP73-AS1Q9UF72 201 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 RAXQ9Y2V3 346 aa7.27□□□□□ -1.25
SYDE2-201ENST00000234668 CRYBG3Q68DQ2 2970 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 K7ENP7 123 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 TCAPO15273 167 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 WDR73Q6P4I2 378 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 TEX45Q8NA69 505 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 C18orf32Q8TCD1 76 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 CENPEQ02224 2701 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 M0R3E3 92 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 CRYGBP07316 175 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 RBPJQ06330 500 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 NIT1Q86X76 327 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 Q8N976 141 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 ZNF596Q8TC21 504 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 GTSF1Q8WW33 167 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 C22orf15Q8WYQ4 148 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 C2orf88Q9BSF0 95 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 CLEC5AQ9NY25 188 aa7.26□□□□□ -1.25
SYDE2-201ENST00000234668 F11RQ9Y624 299 aaKnown RBP7.26□□□□□ -1.25
SYDE2-201ENST00000234668 TRAV9-1A0A075B6T8 112 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 NCBP2LA6PVI3 153 aaKnown RBP7.25□□□□□ -1.25
SYDE2-201ENST00000234668 IGKV1-17P01599 117 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 CRYGCP07315 174 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 IGLC1P0CG04 106 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 MYCNOSP40205 109 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 NBL1P41271 181 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 IGFL4Q6B9Z1 124 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 TMEM116Q8NCL8 245 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 MBD6Q96DN6 1003 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 RNF2Q99496 336 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 RASL11BQ9BPW5 248 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 VKORC1Q9BQB6 163 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 HIGD1AQ9Y241 93 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 ARL2-SNX15V9GYD0 113 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 KIR2DL5BA0A0G2JN68 375 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 KIR2DL5BA0A0G2JPC4 375 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 H0Y8G0 127 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 M0R143 59 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 ZNF324O75467 553 aaPredicted RBP7.25□□□□□ -1.25
SYDE2-201ENST00000234668 HLA-DQA1P01909 254 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 GP9P14770 177 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 FCGR2BP31994 310 aaPredicted RBP7.25□□□□□ -1.25
SYDE2-201ENST00000234668 CASP6P55212 293 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 TMEM183BQ1AE95 376 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 Q56UQ5 140 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 KIR2DL5AQ8N109 375 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 BEND2Q8NDZ0 799 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 GRAMD2BQ96HH9 432 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 KCNS1Q96KK3 526 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 GPR82Q96P67 336 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 SLC25A39Q9BZJ4 359 aaPredicted RBP7.25□□□□□ -1.25
SYDE2-201ENST00000234668 CHODLQ9H9P2 273 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 TMSB15BA0A087X1C1 80 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 INS-IGF2F8WCM5 200 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 TCRAP04437 139 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 CSN3P07498 182 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 ETFRF1Q6IPR1 90 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 LINC00173Q6ZV60 143 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 C8orf46Q8TAG6 207 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 TRGV9Q99603 122 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 CSMD2Q7Z408 3487 aa7.25□□□□□ -1.25
SYDE2-201ENST00000234668 CELSR2Q9HCU4 2923 aa7.24□□□□□ -1.25
SYDE2-201ENST00000234668 TRBV9A0A0B4J1U6 114 aa7.24□□□□□ -1.25
SYDE2-201ENST00000234668 HSBP1O75506 76 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms